| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003440 |
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| Symbol | |
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| ID | 8557173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2026628 |
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| End bp | 2028547 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406535 |
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| Product | ABC transporter ATP-binding protein uup |
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| Protein accession | YP_003286065 |
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| Protein GI | 262394211 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.550149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAC TTACCATTCA TAACGCACAA CTTGCATTTG GTGACCACCC ATTACTGGAC
AAAGCGGAGT TCGCTCTTCA AGAAAACGAA CGCGTTTGTT TAGTGGGTCG CAACGGAGCA
GGTAAGTCCA CGTTAATGAA AGTGCTTGCC GGCGACATTT TGTTGGACGA CGGCAAGATT
CAAATCACTC AAGACGTCGT TGTTTCTCGA CTTGAACAAG ATCCACCGCG TAATCAAGAG
GGTACGGTTT ACGAATACGT ATCTGGCGGT TTGGCTGAAA TCGGCGAACA ACTGAAGATC
TATCACGATC TTCTCGATCT TGTTGCTCAA GACCCGAGTG AGAAAAACAT CAACCGTTTA
GCCAAGGTTC AAGAGCAGCT TGACCATTCT AATGCTTGGC GTTTTGATGA CCGTGTCAAG
AACGTACTTG GTGCTTTAAA ACTAAGTCCA GAAACTAAAC TAACCGATTT ATCCGGTGGC
TGGCAGCGTA AAGCTGCTTT GGCTCGCGCG CTGGTTTGTG ACCCTGATGT ATTGCTTCTT
GATGAGCCAA CAAACCATCT TGATGTAACA ACTATCGAAT GGTTAGAGAA CTTCTTAAAA
GACTTCAAAG GCTCGATCAT CTTTATTTCT CACGACCGTG CGTTCATCAA ATCAATGGCA
ACACGCATTG TTGATTTAGA TCGCGGGCAA TTAGCTTCTT TCCCTGGTGA TTACGACAAC
TACCTAGAAG AAAAAGAAGA GATGCTCCGC GTTGAAGAAA TGCAGAATGC TGAATTCGAC
AAAAAGCTTG CTCAAGAGGA AGTTTGGATT CGGCAGGGCA TTAAAGCACG CCGAACTCGA
AATGAAGGTC GTGTACGCGC ATTGAAGAAA CTTCGTGAAG AGCGTCGCGA TCGCCGGGAT
GTCCAAGGCA AAGTTAACCT TAATATCGAT GATGCTTCAC GTTCAGGGAA AATTGTATTT
GAAGCAGAAA ACATATCTTT TGCTTACGAA GGCAAGACAA TCGTCGACAA CTTTAGCTTT
AACATTATGC GCGGTGACCG TATTGCACTT ATCGGACCAA ATGGCTGCGG TAAGAGTACG
GTACTTAAAT TGCTATTAGG GCAATTGGAA GCGCAGTCTG GTCGTTTACA CTGCGGAACA
AAATTAGAAG TCGCGTACTT TGATCAGTAC CGAGAGATTT TGGATCCAGA AAAGACAGTG
ATCGATAACT TAGCGGATGG GAAACAAGAA GTAATGGTTG GGGGACGTCA GCGTCATGCG
CTGAGTTATC TTCAAGACTT CTTATTTGCA CCTAAGCGCG CAAGAACCCC GGTTAAGGCG
CTCTCTGGTG GTGAGAAAAA CCGATTACTG CTAGCTCGTA TCTTGTTGAA ACCAAACAAC
TTACTTATTC TTGATGAACC AACCAACGAT TTGGATATCG AAACGTTGGA ACTTTTAGAA
GAAATGCTTG CCAACTATCA GGGCACGTTG CTTTTAGTTA GCCACGACCG AGAGTTTGTT
GATAATACTG TTACCACAAG CTGGATCTTC GAAGGAAACG GAGTGATTGA AGAGTTTGTT
GGTGGTTATC ACGATGCAAG ACAGCAGCGT GAACAGGTAT TGGCGGTTCG TCAAGCGGTT
GAAAAGCCAG CGAAAAAAGA AAAAGTGGTT GAGGAAACTC CCAAAACAAC CCAACCTAAG
AACAACTCGA AGAAGTTATC GTATAAGCTG CAAAGAGAAT TAGAAGCTCT ACCAGCTAAA
CTAGAACAAT TAGAGTCGGA TATCGAGGGC CTTCAGGAGC AAGTGAACGA TCCAGAGTTC
TTTGCTAAAC CTGTAGAGCA AACTCAGCCG GTATTGGAAC AGCTTGCTGC ACTAGAGCAG
GAGTTGGAAA TCGCATTCGA GAGATGGGAA GAACTCGAAG CAATGCAACA GGATAGTTAA
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| Protein sequence | MALLTIHNAQ LAFGDHPLLD KAEFALQENE RVCLVGRNGA GKSTLMKVLA GDILLDDGKI
QITQDVVVSR LEQDPPRNQE GTVYEYVSGG LAEIGEQLKI YHDLLDLVAQ DPSEKNINRL
AKVQEQLDHS NAWRFDDRVK NVLGALKLSP ETKLTDLSGG WQRKAALARA LVCDPDVLLL
DEPTNHLDVT TIEWLENFLK DFKGSIIFIS HDRAFIKSMA TRIVDLDRGQ LASFPGDYDN
YLEEKEEMLR VEEMQNAEFD KKLAQEEVWI RQGIKARRTR NEGRVRALKK LREERRDRRD
VQGKVNLNID DASRSGKIVF EAENISFAYE GKTIVDNFSF NIMRGDRIAL IGPNGCGKST
VLKLLLGQLE AQSGRLHCGT KLEVAYFDQY REILDPEKTV IDNLADGKQE VMVGGRQRHA
LSYLQDFLFA PKRARTPVKA LSGGEKNRLL LARILLKPNN LLILDEPTND LDIETLELLE
EMLANYQGTL LLVSHDREFV DNTVTTSWIF EGNGVIEEFV GGYHDARQQR EQVLAVRQAV
EKPAKKEKVV EETPKTTQPK NNSKKLSYKL QRELEALPAK LEQLESDIEG LQEQVNDPEF
FAKPVEQTQP VLEQLAALEQ ELEIAFERWE ELEAMQQDS
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