| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003431 |
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| Symbol | |
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| ID | 8557164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2010712 |
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| End bp | 2012718 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646406526 |
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| Product | tail-specific protease precursor |
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| Protein accession | YP_003286056 |
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| Protein GI | 262394202 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00461835 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGCC GTTCAAAAGT GACACTGATT GCTGCTAGCT TATGGCTAGC AGCATCAGCT
CAGGCTCTCG AAGCCAAACT ACATAAAGAT GACTTGCCGG TTCTCGCTCC TGAAGTTCAG
CACGAAACAG CTAGCAAACG AGTCACCTCT CGATTTACCC GCTCTCATTA TAAGCATTTC
AGCCTCAATG ATGATTTCTC CAAAGCGATC TTTGAACGCT ATGTAGAATT GCTTGATTAT
AATAGAAATA TTTTTACTCA AGCGGACATC GACTCTTTTA AAGACTGGTC AATTGAGCTT
GATGATCAGC TAAAGGCTGG TAACAACCAA ATTGCTTTTG ATGTTTATAA CCTCTCAATG
CAAAAGCGTT TCGAGCGCTT TGCTTATGCG TTAACGCTAC TCGACGAAGA GATCAAGTTT
GATACTGATG ACGAGATAGA GTTAGACCGT TCTGAAGCTG CATGGCCAAA AGACGAAGCG
GAGCTCAACG AGTTATGGCG TAAGCGCGTG AAATATGACG CGTTAAATCT GAAACTGACT
GGCAAAGAAT GGCCAGAGAT TAAAGAGGTT TTAGAGAAGC GTTATAACAA CGCGATGAAG
CGGATCACAC AGACTAATAA CGAAGATGCA TTCCAGTTAT ATATGAATGC CTTCGCCCGA
CAAGTCGACC CTCATACTAG CTACCTTTCT CCACGTAATG CTGAGCAATT CCAATCGGAA
ATGAACCTTT CTCTGGAAGG CATTGGTGCC GTTCTGCAAA TGACTGACGA TTACACAGTA
ATTCGTTCAC TTGTTGTTGG TGGCCCTGCG TCGAAGAGCA AGCAGCTTGG CGAAGGGGAT
CGAATCATCG GTGTTGGACA AGACGGTGAA GAGATTGTCG ACGTGATCGG TTGGCGTCTG
GATGATGTAG TTCAATTAAT CAAAGGCCCA AAAGGCACAA AGGTTAATCT ACAGATCTTG
CCAGAAGGTA ACGATGCGAA GAGTTACATT GTCACAATTG TTCGTGACAA AGTTCGCCTA
GAAGATCGCG CAGTGAAGTC GGAGATCATC GAAAAAGATG GTAAGAAGAT TGGTATTTTA
GAAGTGCCAA GTTTCTACGT CGGTTTGTCG AAAGATACCG ATAAACTGCT TGCTGAGTTA
AAAACCAAAA ACGTTGACGG CGTAATCGTT GATCTACGTA ACAACGGTGG TGGTGCATTA
ACGGAAGCGA CAGCATTAAC AGGGTTATTC ATTAAAGAAG GTCCTGTTGT TCAAGTTCGT
GACAGCTATG GTCGTATTAA GGTGAACGCC GATACTGACG GAAAAGTGAG CTACGATGGT
CCACTGACGG TGTTGATTAA CCGCTACAGT GCTTCAGCGT CTGAAATTTT TGCAGCAGCA
ATGCAAGATT ATAATCGTGC AATTATTTTA GGTGAAAATT CTTTCGGTAA AGGTACGGTT
CAACAGCATC GTTCACTGAA TCATATCTAC GATCTTTTCG ATAAAGAGCT AGGCTACGTT
CAGTACACGA TTCAGAAGTT CTACCGTATT GACGGTGGAA GTACGCAAAA TCGTGGTGTT
GCACCCGATA TTTCGTACCC AACACCAATT GAAGCTTCTG AAACGGGTGA AAGTGTAGAA
GACAATGCAC TACCTTGGGA TCAGATTGAT AAAGCAAAAT ATCAAACCTT CCCAAGCAAC
GAAGCACTAG TTGAAAAGCT TACCGCTCTT CATAACAAGC GTATTTCTGA TGAGATGGAA
TTCCGTTTCA TCAATGAAGA CATAGAGAAG TATCGTAAAG AAAAAGACGA TAATATGTTG
TCTTTGAACG AGAAAGTTCG TAAGGCTGAA TCGGATAAAG CGGAAGCACT TCGTTTGCAA
CGCATCAATG AGCGTCAAGC TGCTTTAGGT AAGGAAGCAT TCAAAACATT GGATGATATA
CCTAAAGATT ATGAAGCGCC TGATGTTTAT TTAGATGAGT CTGTCGCGAT TATGGTTGAT
CTACTCAAGC AGAAAAATCA GTCATAA
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| Protein sequence | MNCRSKVTLI AASLWLAASA QALEAKLHKD DLPVLAPEVQ HETASKRVTS RFTRSHYKHF
SLNDDFSKAI FERYVELLDY NRNIFTQADI DSFKDWSIEL DDQLKAGNNQ IAFDVYNLSM
QKRFERFAYA LTLLDEEIKF DTDDEIELDR SEAAWPKDEA ELNELWRKRV KYDALNLKLT
GKEWPEIKEV LEKRYNNAMK RITQTNNEDA FQLYMNAFAR QVDPHTSYLS PRNAEQFQSE
MNLSLEGIGA VLQMTDDYTV IRSLVVGGPA SKSKQLGEGD RIIGVGQDGE EIVDVIGWRL
DDVVQLIKGP KGTKVNLQIL PEGNDAKSYI VTIVRDKVRL EDRAVKSEII EKDGKKIGIL
EVPSFYVGLS KDTDKLLAEL KTKNVDGVIV DLRNNGGGAL TEATALTGLF IKEGPVVQVR
DSYGRIKVNA DTDGKVSYDG PLTVLINRYS ASASEIFAAA MQDYNRAIIL GENSFGKGTV
QQHRSLNHIY DLFDKELGYV QYTIQKFYRI DGGSTQNRGV APDISYPTPI EASETGESVE
DNALPWDQID KAKYQTFPSN EALVEKLTAL HNKRISDEME FRFINEDIEK YRKEKDDNML
SLNEKVRKAE SDKAEALRLQ RINERQAALG KEAFKTLDDI PKDYEAPDVY LDESVAIMVD
LLKQKNQS
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