Gene VEA_003419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003419 
Symbol 
ID8557152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1995958 
End bp1996878 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content45% 
IMG OID646406514 
Productsiroheme synthase/precorrin-2 oxidase/sirohydrochlorin ferrochelatase 
Protein accessionYP_003286044 
Protein GI262394190 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.827256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATATT TTCCTCTGTT CTTAGATTTA ATCAATAAAC CCGTTCTTGT CGTGGGCGGC 
GGTGAAGTGG CAAGCAGAAA GGTGGAAGCG TTGCTAAAGG CAGGGGCGGA TGTCACTATC
GTTTCTCCAA CGTTGGTCGA TTTTCTGTCT AAGCTTGCTG CAGAGCATCA AGTGCGCTGG
GTGCAACGTT TCTATTCAAG TGACATTGTC ACTAAAAGCT TTGTTCAAGT GTGGGCCACG
ACAGATAATC CTGAGCTAAA TCACCAAGTG TATAAAGATG CGAAAGAATT AGGCATCCTA
GTGAACGTTG TGGATGATAA GCCTTATTGT GACTTCATTA CGCCCTCTAT GATCAATCGT
GGCCGCATAC AAATTGCTAT TTCTAGTGGC GGTGCCTCAC CAGTTTTAAT TCGAAACATC
CGTGAAAAGC TTGAATCGAT ACTGCCACAA AACATGGGGT TGATGGCGGA CTTTGCTAAC
TCAAAGCGTA ATTCGATTAA AGAAGCACTA CCTAGCGTCG ATTTACGTCG TAAGTTTTGG
GAGCAATTCT TCTCGAATCC TGAGGTTGAA AACGCGCGAG ATAATAGAGA GTTAGAAACG
ATTTACCAAG CGACCATGGC AACACCTTTG GATGAAAAGG GAAGTTGTAC TTGGATACAG
GTAGGGAAAG ACGTTGAGAT GTTGCCAATT AAGGCCGTGC GCTACATGCA ACAAGCCGAG
CTAGCACTTT ACTCAACTCG ATGCGAAGCG AACGTGTTAG AGCTAATACG AAGAGATGCA
GAGCGAGAAG CTTTCTCCAG CGCAGCTGAA CTCTCTGATA TGTTGACCAA GGCTAAATCT
GAAAAGCTTC GAGTTTGCGT GTTTATCCCT AAAGGGACGA GCGAGTTCTT ATTGCTGCAA
GGGCAGGACT TGGTGATATA A
 
Protein sequence
MRYFPLFLDL INKPVLVVGG GEVASRKVEA LLKAGADVTI VSPTLVDFLS KLAAEHQVRW 
VQRFYSSDIV TKSFVQVWAT TDNPELNHQV YKDAKELGIL VNVVDDKPYC DFITPSMINR
GRIQIAISSG GASPVLIRNI REKLESILPQ NMGLMADFAN SKRNSIKEAL PSVDLRRKFW
EQFFSNPEVE NARDNRELET IYQATMATPL DEKGSCTWIQ VGKDVEMLPI KAVRYMQQAE
LALYSTRCEA NVLELIRRDA EREAFSSAAE LSDMLTKAKS EKLRVCVFIP KGTSEFLLLQ
GQDLVI