Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003399 |
Symbol | |
ID | 8557132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1957030 |
End bp | 1957725 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406494 |
Product | queuosine Biosynthesis QueC ATPase |
Protein accession | YP_003286024 |
Protein GI | 262394170 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.270853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAG CCGTTGTTGT TTTTAGTGGT GGTCAGGATT CCACGACTTG TCTGGTTCAA GCACTTAAAG AGTTTGATGA AGTTCATGCC ATTACTTTTG ATTATGGTCA GCGCCACAAG TTAGAGATAG AAGTGGCACA AAATATCGCA AAGGATCTTG GTGTCAAAGC GCATAAAGTG ATGGATGTTG GCCTTTTAAA CGAACTTGCG ATTAGCTCTC TCACGCGCGA TGACATCCCT GTCTCACACG AATTGCAAGA AAACGGCCTA CCAAACTCTT TTGTTCCTGG CCGTAACATT CTATTTTTAA CGCTCGCAGG AATCTACGCC TACCAAATTG GGGCTGAAAC CGTAATTACT GGCGTGTGTG AAACTGACTT TAGTGGTTAT CCAGATTGTC GTGACGATTT TGTGAAAGCA ATGAACACGG CTTTGGTGAA AGGGATGGAC CGTAACCTGA CGATCAAAAC ACCGTTAATG TGGCTAAATA AAGCAGAAAC GTGGGCGTTA GCTGATCAAT ATGACGCGTT GCAACTGGTT CGTGAAAATA CGTTGACCTG CTACAACGGG GTCATTGGTG ATGGTTGCGG TGATTGCCCA TCGTGCGATT TGCGCAAGGC TGGCTTAGAT GATTACCTAA ACAATAAAGA GACCGTAATG CAGTCTCTTG TGAACAAGCA GGCTGCTGAC GTTTAG
|
Protein sequence | MKKAVVVFSG GQDSTTCLVQ ALKEFDEVHA ITFDYGQRHK LEIEVAQNIA KDLGVKAHKV MDVGLLNELA ISSLTRDDIP VSHELQENGL PNSFVPGRNI LFLTLAGIYA YQIGAETVIT GVCETDFSGY PDCRDDFVKA MNTALVKGMD RNLTIKTPLM WLNKAETWAL ADQYDALQLV RENTLTCYNG VIGDGCGDCP SCDLRKAGLD DYLNNKETVM QSLVNKQAAD V
|
| |