| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003356 |
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| Symbol | |
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| ID | 8557089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1914386 |
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| End bp | 1915201 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406451 |
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| Product | multidrug resistance efflux pump |
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| Protein accession | YP_003285981 |
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| Protein GI | 262394127 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000276837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTGTCA TTGATGATGA AGACTTTATT GCCAACCAAG AAATTGCTCG AGCAGCACTA
GATGTTGCGA AATCTGAGCT TACTGCAAAT CAAATCAAAA CGGATATGCA GTTAATGAAA
ATTGAGCAGG CGAAGCAAGG TATTCGCCGC GCGAGTGCAA ATGCCGAACA CCAAGCGGCG
GAGTTTCAAC GTCTTTCTCG TTTGGTACAA AAGCAATCTG TGAGCAAAAA TCAGTTTGAA
GCACAAAAAA CGCGATCTAT TGAAGCAAGC AGTAATCTTG AAACCGCTAA ATTGGGCTTA
GCTGCTGAGC AAAAACAGCT CGACACATTG ATGACCGAGA AGTTGCAACT GACAGCACAG
CGTAAAAAAG CAGAAGCAAA CTTACGACTG GCTAATATTT CACTGGAAAG AACCACGGTG
CGTGCGCCAT TCGATGGCTA TGTGGCAGAT AGACAAGTGC AAGTCGGCAA GTTTGTACAA
CCAGGAATGG GGCTCATCGT GATGGTGCCA GATTATGTTT GGATAGAGGC AAACTTTAAA
GAAACACAAC TTGAGAACGT TGTGCCTGGG CAAGAGGTTG AAGTGGTATT GGATATGTTT
CCAAACCATC CATTGCATGG CCGTGTTTCT TCGATCACCC CGGCGACTGG TGCACAGTTT
AGTTTATTGC CACCTCAAAA TGCGACAGGC AATTTCGTAA AAGTAGTACA ACGTGTACCA
GTACGTATTG AGCTAGAGAT CCCTCAAGAG TTGAGTCAAC GAGTCTATCC GGGGTTGTCT
GCAGAAGTAT CGATCGAGAC CGCGGCACAA GGTTAA
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| Protein sequence | MFVIDDEDFI ANQEIARAAL DVAKSELTAN QIKTDMQLMK IEQAKQGIRR ASANAEHQAA
EFQRLSRLVQ KQSVSKNQFE AQKTRSIEAS SNLETAKLGL AAEQKQLDTL MTEKLQLTAQ
RKKAEANLRL ANISLERTTV RAPFDGYVAD RQVQVGKFVQ PGMGLIVMVP DYVWIEANFK
ETQLENVVPG QEVEVVLDMF PNHPLHGRVS SITPATGAQF SLLPPQNATG NFVKVVQRVP
VRIELEIPQE LSQRVYPGLS AEVSIETAAQ G
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