Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003317 |
Symbol | |
ID | 8557050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1875901 |
End bp | 1876881 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406412 |
Product | membrane-fusion protein |
Protein accession | YP_003285942 |
Protein GI | 262394088 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCTA AATCACTAAA ACCCGTTTTA CTCTCACTTT GTGCTTTGGG TGTTGCCTCT TGGGTTGGGT ACCAATTTTA CCAAGCCTAT CAACCGGAAC CGATCCGCTT ACAGGGATTA ATTGAAGCCC AGCAATACAG CATTTCCTCA AAAGTTCCAG GGCGTATTGA TGAGGTCATG GTACGTAAAG GCGACGATGT AGAGAAAGGT CAGCTTATTT TTACCCTTCA TAGTCCTGAA ATTGAAGCGA AGTTAGAACA AGCAAAAGCA GGTGAAAAAG CGGCGGACGC CTTAGCTCAA GAAGCTGAAA AAGGCGCACG CGAGCAACAA ATCCAAGCAG CAAAAGATCA GTGGATGAAA GCCAAGGCCG CTGCGAATTT AATGGAAAAA ACCTACAATC GTGTGAATAA CCTTTATAAC GATGGCGTGG TTGCAGAACA AAAGCGCGAT GAAGCTTTAA CTCAGTGGCA AGCAGCGAAA TACACAGAAA GTGCCGCGTT TCAAATGTAT GAAATGGCAA AAGAAGGTGC TAGAAGTGAA ACCAAAGTAG CTGCGGCGGA AAAAGCGCGC ATGGCATCGG GTGCGGTAGC CGAAGTAGAA GCGTATGCGA AAGATACTCA GATCTACAGC TGGTTTGACG GCGAAGTCTC TCAAGTTCTA CTTCAAAGTG GTGAATTAGC ACCTCAGGGC TTCCCGGTTG TTACTGTGAT AGATACAGAA GATGCCTGGG CGACACTTAA TGTGCGTGAA GATTACCTTC AACACTTTAA AAAAGGAGCA ACCTTTGATG CCTATTTGCC TGCCTTAAAC AAAAATGTTG AGTTCAAAGT AACGCATGTT GCTGTTATGG GTGACTTTGC AACGTGGAGA GCAACCGATG CTTCTCAAGG TTTTGATCTT CGTACCTTTG AAGTAGAAGC TCGTCCAGCT CAACCCGAAC CTGAACTGCG TATGGGAATG AGTGTTGTCG TTGAACTTTA A
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Protein sequence | MAAKSLKPVL LSLCALGVAS WVGYQFYQAY QPEPIRLQGL IEAQQYSISS KVPGRIDEVM VRKGDDVEKG QLIFTLHSPE IEAKLEQAKA GEKAADALAQ EAEKGAREQQ IQAAKDQWMK AKAAANLMEK TYNRVNNLYN DGVVAEQKRD EALTQWQAAK YTESAAFQMY EMAKEGARSE TKVAAAEKAR MASGAVAEVE AYAKDTQIYS WFDGEVSQVL LQSGELAPQG FPVVTVIDTE DAWATLNVRE DYLQHFKKGA TFDAYLPALN KNVEFKVTHV AVMGDFATWR ATDASQGFDL RTFEVEARPA QPEPELRMGM SVVVEL
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