Gene VEA_003284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003284 
Symbol 
ID8557017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1843625 
End bp1844830 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content45% 
IMG OID646406379 
Productintegrase 
Protein accessionYP_003285909 
Protein GI262394055 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATCA AGCAAAAGAT TACCAATACC TCAATCAAGA GTTTTAAGGT CGATGACAAG 
CGTTTGAACG ACACTGAGAT CAGCGGTTTT CACGCTCGTA TCTCCCCCAA AGGCATCATC
AAATACTACT TTTACTATCG CCTGAATGGG AAGCAGAGAA ACTACCTCTT AGGTGCAGCA
ACTTCTTTAA CGCCTGCTCA AGCCCGAGAT TTAGCAAAAG AAAAAGCAGG TCTTGTCGCA
GGTGGACAAG ATGTTCAGGA AACGCGTTTT GAAGCCAAAC GTGAAGCGTT AAGAAAGACA
CTGACCCTAG AACGATTTCT TGATGAACAT TACGAGAGTT ACTTACAGGC TCTAAACCCT
AAAACAGCCA AACAATCCTT TATGTGCATA AAAAGCAGCT TCAAGCATTT AGCTCATAAA
CCCATGTCTG AAATTACGGC TTGGGACGTT CAACAATGGG TGTCTGAAAA GCGCAAGTTG
GGTAGGGCAT CATCAACCAT TTCATACGCC TACAATCGCT TGAAAGCCGC GTTTAACCGA
GCTGTTGAAT GGGACTTCAT TGATTCTCAT ACGCTCAGTA GTGTGAAGAT AGTCAAAGAA
GATGATCAGC GTATTCGTTA TCTGTCTACG GCAGAAGAAA CAGCGTTATT AGACTCCTTG
AAAGTGCGTG ACATTCGCCT GAGGGAAAAT CAGAAGCAAG CCCATCGTCA GGAAGTGCCC
AAGCTGCGGT ATGCGGATTA TTTAGAGCCT TTAATCGTGA TGGCGATTAA TACGGGCATG
CGAAAGGGTG AAATGCTGTC ATTATGTTGG GAGCACATTA ACTTCGAAAA TCGTTATCTC
ACCATTACCT CAGCAAATGC GAAGTCTAAG AAACGCCGAA CCATTCCTTT AAACGATACC
GTTTTCTCCA TGCTGAACGA TTGGAAGGCT CAGAACTATA GTGAGGAAAG TGGGCTCGTG
TTTACCTCAA ATGGAAAGCC GATTGATACC TACCAATATC AATGGGAGCA ATTACTGAAA
GACGCCAATA TTCAGAACTT CCGTTTTCAC GACTTATGCC ATCACTTCGC CAGCAAGCTT
GTCATGGCAG CGGTGGATTT GAATACCGTT CGGGAGCTTC TTGGTCATGC CGATTTAAAG
ATGACGTTGC GCTATGCCCA CTTAGCACCA GAACACAAAG CATCGGCGGT GAACCTGATT
GGTTAG
 
Protein sequence
MAIKQKITNT SIKSFKVDDK RLNDTEISGF HARISPKGII KYYFYYRLNG KQRNYLLGAA 
TSLTPAQARD LAKEKAGLVA GGQDVQETRF EAKREALRKT LTLERFLDEH YESYLQALNP
KTAKQSFMCI KSSFKHLAHK PMSEITAWDV QQWVSEKRKL GRASSTISYA YNRLKAAFNR
AVEWDFIDSH TLSSVKIVKE DDQRIRYLST AEETALLDSL KVRDIRLREN QKQAHRQEVP
KLRYADYLEP LIVMAINTGM RKGEMLSLCW EHINFENRYL TITSANAKSK KRRTIPLNDT
VFSMLNDWKA QNYSEESGLV FTSNGKPIDT YQYQWEQLLK DANIQNFRFH DLCHHFASKL
VMAAVDLNTV RELLGHADLK MTLRYAHLAP EHKASAVNLI G