Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003165 |
Symbol | |
ID | 8556898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1740879 |
End bp | 1742423 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646406260 |
Product | transcriptional repressor protein TyrR |
Protein accession | YP_003285790 |
Protein GI | 262393936 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGTCTTG AAGTCTTATG TGAAGATCGA CTCGGCTTGA CCCGAGAACT GCTCGATATT TTAGCGTCTA AAAGCATCGA CTTGCGTGGT ATCGAAATCG ATATTAGCGG TATTATCTAT TTGAATTGCC CAGATATTGA TTTTGATACG TTTAGTGAGC TGATGGCTGA AATCCGCCGT ATTCCGGGGG TGAAAGACGT ACGTAAAATC CAGTTTATGC CGATGGAGCG CCACAATACG GAGCTGCTCT CGCTAGTTGA TAACTTGCCC GATCCGGTCT TTGCCATCGA CCTTAAAGGT GCCGTAGACA TGGCAAACAT GTCTGCACTT TCATTGCTTG GCCTTCACAA GCAAGAAGTG ATTGGTACTC AAATCGGTGC TTTGTTACCA AGTGTTCGTT TCTCTCGTTG GTCTGAAGGT GTTAATGGCC GAACGCGGGA AAACCTTGTG ATTGATGGCT TGGACTATGT TCTAGAGTTG ATGCCAGTTT ATATCCGAGA CGAAGCGCAA AACTCGACTC TAGCGAGTAC TCTAATGACG ATTCGCTCTA GTCAGCAAGT TGCCAGAATT GAAGAAGCGC TACCGCTGCA TAATCCTCTG GGTTTTGAGC ACTTTGTTGG TATATCGAAC CGTCATAAAG CGCTAATGAA CCAAGCTAAG AAGCTGTCTG TGCTTGATCA ACCACTGTTG ATTGAGGGCG AAACGGGGAC CGGTAAAGAA ATGCTTGCTA AAGCTTGCCA CAGCCGTTCT AGCCGTGCGA GCAAGCCATT CTTAGTTTTG AGTTGTGCTT CGATGCCTGA CGATGTAGCA GAAACCGAAC TTTTTGGTCA TGCTCCGGGC TCGTTTAACC ACGAACAAGG TCACAAAGGC ATCTTTGAGC AAGCAAACGG CGGTACGGTA TTTCTTGATG AAATCGGTGA AATGAGCTCG CATCTTCAAA TCAAGCTGTT ACGTTTTCTA CAGGATGGTA ATTTCCGTCG TGTTGGTGCA GAAGATGAGA TGCATGTCGA TGTTCGCATC ATCGCTTCAA CAAAACATAA CCTTGCCGAG CTTTCTGAAG CGGGTATGTT CCGTGAAGAT TTGTATTATC GTCTCAACGT ACTTACGCTC AGCATTCCTC CGTTACGTAA GCGCTCAAAC GACGTTGCGC CATTGCTTGA TTTGTTTGTG GCGAAACATG CTCAACAGCT TGGTATTGAT AAGCCAGAGT TTGATGATGG TCTAGTTGAT GCCCTTGCAA ATTATCAGTG GCCAGGAAAC ATGCGCCAGC TGGATAACAT GGTTCTTCGA GCGCTCACAG AAATGGATGG TGGTATACTA AACGCGGAGC ACTTCAATTT ACCTCAGCCT CAGTCAGTCG GCGCTGGTAG TGCAACGCTT AACATCGACG GTTCATTGGA TGAGATCATG CGTGATTATG AATCTCAAGT TCTGGAACGT TTGTATCAGT CATTCCCATC AAGCCGCAAG CTTGCTAAGC GCTTAAATGT ATCGCATACC TCAATCGCTA ATAAACTGCG TGATTACGGT ATCCGCAAGA ATTAA
|
Protein sequence | MRLEVLCEDR LGLTRELLDI LASKSIDLRG IEIDISGIIY LNCPDIDFDT FSELMAEIRR IPGVKDVRKI QFMPMERHNT ELLSLVDNLP DPVFAIDLKG AVDMANMSAL SLLGLHKQEV IGTQIGALLP SVRFSRWSEG VNGRTRENLV IDGLDYVLEL MPVYIRDEAQ NSTLASTLMT IRSSQQVARI EEALPLHNPL GFEHFVGISN RHKALMNQAK KLSVLDQPLL IEGETGTGKE MLAKACHSRS SRASKPFLVL SCASMPDDVA ETELFGHAPG SFNHEQGHKG IFEQANGGTV FLDEIGEMSS HLQIKLLRFL QDGNFRRVGA EDEMHVDVRI IASTKHNLAE LSEAGMFRED LYYRLNVLTL SIPPLRKRSN DVAPLLDLFV AKHAQQLGID KPEFDDGLVD ALANYQWPGN MRQLDNMVLR ALTEMDGGIL NAEHFNLPQP QSVGAGSATL NIDGSLDEIM RDYESQVLER LYQSFPSSRK LAKRLNVSHT SIANKLRDYG IRKN
|
| |