Gene VEA_003165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003165 
Symbol 
ID8556898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1740879 
End bp1742423 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content46% 
IMG OID646406260 
Producttranscriptional repressor protein TyrR 
Protein accessionYP_003285790 
Protein GI262393936 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG3283] Transcriptional regulator of aromatic amino acids metabolism 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTCTTG AAGTCTTATG TGAAGATCGA CTCGGCTTGA CCCGAGAACT GCTCGATATT 
TTAGCGTCTA AAAGCATCGA CTTGCGTGGT ATCGAAATCG ATATTAGCGG TATTATCTAT
TTGAATTGCC CAGATATTGA TTTTGATACG TTTAGTGAGC TGATGGCTGA AATCCGCCGT
ATTCCGGGGG TGAAAGACGT ACGTAAAATC CAGTTTATGC CGATGGAGCG CCACAATACG
GAGCTGCTCT CGCTAGTTGA TAACTTGCCC GATCCGGTCT TTGCCATCGA CCTTAAAGGT
GCCGTAGACA TGGCAAACAT GTCTGCACTT TCATTGCTTG GCCTTCACAA GCAAGAAGTG
ATTGGTACTC AAATCGGTGC TTTGTTACCA AGTGTTCGTT TCTCTCGTTG GTCTGAAGGT
GTTAATGGCC GAACGCGGGA AAACCTTGTG ATTGATGGCT TGGACTATGT TCTAGAGTTG
ATGCCAGTTT ATATCCGAGA CGAAGCGCAA AACTCGACTC TAGCGAGTAC TCTAATGACG
ATTCGCTCTA GTCAGCAAGT TGCCAGAATT GAAGAAGCGC TACCGCTGCA TAATCCTCTG
GGTTTTGAGC ACTTTGTTGG TATATCGAAC CGTCATAAAG CGCTAATGAA CCAAGCTAAG
AAGCTGTCTG TGCTTGATCA ACCACTGTTG ATTGAGGGCG AAACGGGGAC CGGTAAAGAA
ATGCTTGCTA AAGCTTGCCA CAGCCGTTCT AGCCGTGCGA GCAAGCCATT CTTAGTTTTG
AGTTGTGCTT CGATGCCTGA CGATGTAGCA GAAACCGAAC TTTTTGGTCA TGCTCCGGGC
TCGTTTAACC ACGAACAAGG TCACAAAGGC ATCTTTGAGC AAGCAAACGG CGGTACGGTA
TTTCTTGATG AAATCGGTGA AATGAGCTCG CATCTTCAAA TCAAGCTGTT ACGTTTTCTA
CAGGATGGTA ATTTCCGTCG TGTTGGTGCA GAAGATGAGA TGCATGTCGA TGTTCGCATC
ATCGCTTCAA CAAAACATAA CCTTGCCGAG CTTTCTGAAG CGGGTATGTT CCGTGAAGAT
TTGTATTATC GTCTCAACGT ACTTACGCTC AGCATTCCTC CGTTACGTAA GCGCTCAAAC
GACGTTGCGC CATTGCTTGA TTTGTTTGTG GCGAAACATG CTCAACAGCT TGGTATTGAT
AAGCCAGAGT TTGATGATGG TCTAGTTGAT GCCCTTGCAA ATTATCAGTG GCCAGGAAAC
ATGCGCCAGC TGGATAACAT GGTTCTTCGA GCGCTCACAG AAATGGATGG TGGTATACTA
AACGCGGAGC ACTTCAATTT ACCTCAGCCT CAGTCAGTCG GCGCTGGTAG TGCAACGCTT
AACATCGACG GTTCATTGGA TGAGATCATG CGTGATTATG AATCTCAAGT TCTGGAACGT
TTGTATCAGT CATTCCCATC AAGCCGCAAG CTTGCTAAGC GCTTAAATGT ATCGCATACC
TCAATCGCTA ATAAACTGCG TGATTACGGT ATCCGCAAGA ATTAA
 
Protein sequence
MRLEVLCEDR LGLTRELLDI LASKSIDLRG IEIDISGIIY LNCPDIDFDT FSELMAEIRR 
IPGVKDVRKI QFMPMERHNT ELLSLVDNLP DPVFAIDLKG AVDMANMSAL SLLGLHKQEV
IGTQIGALLP SVRFSRWSEG VNGRTRENLV IDGLDYVLEL MPVYIRDEAQ NSTLASTLMT
IRSSQQVARI EEALPLHNPL GFEHFVGISN RHKALMNQAK KLSVLDQPLL IEGETGTGKE
MLAKACHSRS SRASKPFLVL SCASMPDDVA ETELFGHAPG SFNHEQGHKG IFEQANGGTV
FLDEIGEMSS HLQIKLLRFL QDGNFRRVGA EDEMHVDVRI IASTKHNLAE LSEAGMFRED
LYYRLNVLTL SIPPLRKRSN DVAPLLDLFV AKHAQQLGID KPEFDDGLVD ALANYQWPGN
MRQLDNMVLR ALTEMDGGIL NAEHFNLPQP QSVGAGSATL NIDGSLDEIM RDYESQVLER
LYQSFPSSRK LAKRLNVSHT SIANKLRDYG IRKN