Gene VEA_003147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003147 
Symbol 
ID8556880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1719778 
End bp1721184 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content44% 
IMG OID646406242 
ProductGntR-family regulatory protein 
Protein accessionYP_003285772 
Protein GI262393918 
COG category[K] Transcription
[E] Amino acid transport and metabolism 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00323958 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGAT ACCGTCAATT GGCCGAATTG TTTAAGGCAC AAATTCAGCA AGATACTTGG 
AGAGCAGGGG AGAAGCTGCC TTCAATACGC GTCACCAGCC GCAATCATTC CGTAAGTGCA
GGTACGGTAT TACAAGCCTA TCAATTGCTA GAGGCGCAAG GCTGGGTGAT AGCAAAGCCT
CAATCTGGTT ACTATGTGAC TGCCGATCTT GAACGTCTCA CTAATACGAA TGGAATTAAA
AGCAACAATA CACCATGCAC CAAGTTGAAT GATGAGTTGT ATTCGTTTTT GAAGCATCAA
GCAACATCGG ATGTTGTTCA TTTAGGCTCG GCGTTTCCGG ATCCGTGTTT GTTTCCTTTA
GAGTCGCTTA ACCGTAATTT GGCCAGCTCG GGACGAAAAA TGGGGCCGGA TAAGTTGCTA
GACAACCTAC CTCCTGGTGC TGAGTCGTTA AGGCGACTCG TCGCTCAGAG GTATATTCAT
CATGGGATAT CACTAACCCA TGATGATGTG GTTATTACTT CCGGTGCGCT AGAAGCATTA
AACTTGAGTT TGCAAGCGGT CACCCGACCA GGTGATACCG TCGTTGTTGA ATCCCCAACG
TTTTATGGCG CACTTCAAGC GGTAGAACGG TTAGGTCTCA AGGCTATTGA AATCAGTGTC
GATGATGAGA GTGGGCATTC GCTTGAACAA ATCGAAGCAG CTTTTGCCAA TGAAGATGTT
CGGGCTTGTT GGTTAATGAC GAACTTTCAT AATCCAACCG GGGCTTCTTT GTCTGATGAA
CACAAACGAT ACATTGTTGA GTTAGCCAAT CGATATGATG TGTATCTCAT TGAAGACGAT
GTGTACTCTG AGCTGTATTT TTCTGACAAA AGGCCGAACT CATTAAAGAG CTTTGATGAG
CAAGAACGTG TCCTTCATTG TGGTTCTTTT TCTAAGAGTT TATGCCCTGG ATATCGCTTG
GGTTGGGTGG TGAATAAGCG TTTTAACGAG ACTATTCAAA AGCTCCAGTT AATATCGACA
TTGTCTGGGA GTGCCCCTAT TCAGCAGGGA GTTGCACACT ACTTACAAAA CGACAGTTAC
GACAACCACC TGAGAAAGCT GCGTAAGACA CTGCAACACC GTCAAGCTGA CTTCGTGGAT
TTACTCGCAA AGCACATACC TAAAGAGGTT ACCTATCAAC GTCCTGATGG TGGTTACTTT
CTTTGGCTGA AATTGCCAGA TGGAATATCA AGTAAAGCGG TATATCAAGC ACTATTGTCT
GAGCATGTTA CCGTCGCTTA TGGCAAACTC TTTTCGATAA GTGATCAATA CGAAAACTAT
TTAAGACTGA ATGCATCGCT TCCTTTAGAA ACGAGTTTAG AACGTGCTAT CAAAAGATTA
GGTGATTTGC TTCGCGAATT ACTCTGA
 
Protein sequence
MNRYRQLAEL FKAQIQQDTW RAGEKLPSIR VTSRNHSVSA GTVLQAYQLL EAQGWVIAKP 
QSGYYVTADL ERLTNTNGIK SNNTPCTKLN DELYSFLKHQ ATSDVVHLGS AFPDPCLFPL
ESLNRNLASS GRKMGPDKLL DNLPPGAESL RRLVAQRYIH HGISLTHDDV VITSGALEAL
NLSLQAVTRP GDTVVVESPT FYGALQAVER LGLKAIEISV DDESGHSLEQ IEAAFANEDV
RACWLMTNFH NPTGASLSDE HKRYIVELAN RYDVYLIEDD VYSELYFSDK RPNSLKSFDE
QERVLHCGSF SKSLCPGYRL GWVVNKRFNE TIQKLQLIST LSGSAPIQQG VAHYLQNDSY
DNHLRKLRKT LQHRQADFVD LLAKHIPKEV TYQRPDGGYF LWLKLPDGIS SKAVYQALLS
EHVTVAYGKL FSISDQYENY LRLNASLPLE TSLERAIKRL GDLLRELL