Gene VEA_003136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003136 
Symbol 
ID8556869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1708225 
End bp1708863 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content46% 
IMG OID646406231 
Producttranscriptional regulator LuxR family protein 
Protein accessionYP_003285761 
Protein GI262393907 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.12843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAC CGATTAGTGT GGTGATTGTT GATGATCATC AAGTGGTCTT AGATGGCTTC 
ATGGCTCGCT TGGAGTTAGA GCCTGATATT GAAGTGGTCG GTACAGCAAG CAATGGGCTG
GAAGCGATTG AAGTCGCAAA GCACCTTCAG CCTGATGTCA TCTTGATGGA CATTAGCATG
CCGATAATGA ACGGTATTGA AGCGACAGGG GTAATTAAAG AAGAGCGACC AGAAAGCAAA
ATACTTATGC TGACCATGCA CGATAACCGT GAATACATCA TGAAGGTCAT GCAAGCTGGC
GCAGTAGGGT ACATGCTCAA GGAAATCTCG GCCGAGAAAA TGGTGCAAGC AATAAAAACG
GTGAATCAAG GTTCAACGTA TTTCTGCGAG TCTGTCACAC AAACGCTTTT TACCCAAGAG
GTGGTGCCAG CCACTCAAAA AACGAATCCA CTTAGCCGCA GGGAAGAAGC GGTGCTTAAA
TTAGTCGCTC AAGGAAACAG CAGTAAGAAA ATCGCCACAC TGCTTAACAT TAGCTACCGA
ACGGTAGAGA CGCATCGCCA CAACATTAAG CACAAGTTGG ATTTACATTC GACGGCGGAG
CTAGCGAAAT ATGCGTTTGA AACAGGGTTA ACGGAGTAG
 
Protein sequence
MDKPISVVIV DDHQVVLDGF MARLELEPDI EVVGTASNGL EAIEVAKHLQ PDVILMDISM 
PIMNGIEATG VIKEERPESK ILMLTMHDNR EYIMKVMQAG AVGYMLKEIS AEKMVQAIKT
VNQGSTYFCE SVTQTLFTQE VVPATQKTNP LSRREEAVLK LVAQGNSSKK IATLLNISYR
TVETHRHNIK HKLDLHSTAE LAKYAFETGL TE