Gene VEA_003102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003102 
Symbol 
ID8556835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1670241 
End bp1671485 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content47% 
IMG OID646406197 
Productcarboxynorspermidine dehydrogenase putative 
Protein accessionYP_003285727 
Protein GI262393873 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.185885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTC TACAGATTGG TGCAGGCGGC GTTGGCTGGG TAGTTGCACA TAAAGCAGCA 
CAAAACAACG ACGTTCTGGG TGATATCACA ATCGCATCAC GTACCGTAGG TAAGTGTGAG
AAAATCATCG AATCGATTCA GAAGAAAAAC AATCTGAAAG ATTCAACTAA GAAACTAGAA
GCTCGTGCGG TAAACGCGGA CGACGTAGAT TCTTTAGTTG CTTTAATTAA AGAAGTGCAG
CCTGACTTAG TGATCAACGC GGGTCCTCCT TGGGTGAACA TGTCTATTAT GGAAGCATGT
TACCAAGCTA AAGTGTCATA CCTTGATACA TCTGTTGCGG TTGATTTGTG TTCTGAAGGC
CAACAAGTAC CTCAAGCTTA CGATTGGCAG TGGGGCTACC GTGAGAAGTT TGAAGAGGCG
GGTATCACAG GTATTCTTGG TGCCGGTTTC GATCCGGGCG TAGTATCGGT GTTTGCCGCA
TACGCAGTGA AGCATCTGTT CGATGAAATC GATACTATCG ACGTAATGGA TGTCAACGCA
GGCGACCACG GCAAGAAGTT CGCAACTAAC TTTGATCCAG AAACGAACAT GCTTGAGATT
CAAGGTGATT CCTTCTACTG GGAAAACGGC GAGTGGAAAC AAGTACCTTG TCACTCACGT
ATGCTTGAGT TTGAATTCCC GAACTGTGGT TCACATAAAG TGTACTCAAT GGCGCACGAC
GAAGTTCGAT CTATGCAAGA GTTCATCCCG GCGAAACGTA TCGAATTCTG GATGGGCTTT
GGTGATCGTT ACCTAAATTA CTTCAATGTA ATGCGTGACA TCGGTCTACT CAGCCCAGAT
CCACTAACAC TGCACGACGG CACGGTTGTT CAACCTTTGC ACGTGCTTAA AGCGTTGCTG
CCAGATCCAA CATCACTAGC TCCTGGTTAC ACTGGCCTAA CGTGTATCGG TACTTGGGTT
CAAGGTAAGA AAGACGGTAA AGAGCGCAGT GTGTTCATCT ACAACAACGC AGATCACGAA
GTTGCATACG AAGATGTTGA ACACCAAGCT ATCTCATACA CCACTGGCGT ACCTGCGATC
ACCGCGGCTT TGCAGTTTTT CCGTGGTAAG TGGGCAGACA AAGGCGTGTT CAACATGGAG
CAGCTAGATC CAGACCCATT CCTAGAAACC ATGCCATCGA TTGGTCTAGA TTGGCATGTT
CAAGAACTGG AGCCAGGACA ACCTGTTATC CATAAATTGA AGTAA
 
Protein sequence
MAILQIGAGG VGWVVAHKAA QNNDVLGDIT IASRTVGKCE KIIESIQKKN NLKDSTKKLE 
ARAVNADDVD SLVALIKEVQ PDLVINAGPP WVNMSIMEAC YQAKVSYLDT SVAVDLCSEG
QQVPQAYDWQ WGYREKFEEA GITGILGAGF DPGVVSVFAA YAVKHLFDEI DTIDVMDVNA
GDHGKKFATN FDPETNMLEI QGDSFYWENG EWKQVPCHSR MLEFEFPNCG SHKVYSMAHD
EVRSMQEFIP AKRIEFWMGF GDRYLNYFNV MRDIGLLSPD PLTLHDGTVV QPLHVLKALL
PDPTSLAPGY TGLTCIGTWV QGKKDGKERS VFIYNNADHE VAYEDVEHQA ISYTTGVPAI
TAALQFFRGK WADKGVFNME QLDPDPFLET MPSIGLDWHV QELEPGQPVI HKLK