| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003101 |
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| Symbol | |
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| ID | 8556834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1667346 |
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| End bp | 1670222 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406196 |
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| Product | diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase |
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| Protein accession | YP_003285726 |
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| Protein GI | 262393872 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.26432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTG CCTTTGAAGT CGATAGCAAT ATCGCAAACA TTTTTTCGTC TCAGGTTCCT
ATCGTTGAGG GAACGTATGA CTTAACGCCA GATCAAGTAT TGATTGATCA GGCTGAGCAT
GAATCTGAAG TGCGTTCTTA TCCACGTCGC TTGCCAATCG CAATCAAACA AGCTTTTGGT
TGCTTGGTTG AAGATACACG TGGACAGATC TTTTTAGACT GCCTTGCGGG GGCGGGCACG
CTAGCTTTGG GGTATAACCA TCCTGAAATA AACCAAGCTC TGAAAGAGCA ATTAGATTCG
GGTCTGCCAT ATCAGACGCT AGATATTGCA ACATCAGCAA AAACGACGTT TATTCAATCT
GTTAAATCTT TTCTTCCTCA AGAGTTAAGT GAGAACAGCG TTATCCAATT TTGTGGTCCG
TCTGGAGCCG ATGCAGTTGA AGCCGCGATC AAGCTCGCGA AGCAGACTAC TGGTCGCAAC
ACCATGTTTG CTTTTCGTGG CGCATATCAT GGTATGACTA ACGGCACAAT GGGAATGATG
GGCAACCTAG GTACGAAAGC GCGTCGAACT GGTTTAATGT CAGACGTGCA CTTTATGCCT
TTCCCATACA ATCTGCGTTG TCCATTTGGG CTTGGCGGTG ATGAAGGTGC GAAAGCAAGT
ATTCGCTATA TCGATCGTCT TTTAAACGAT GATGAATCGG GCATTATGAA GCCTGCTGCG
ATCATCGTTG AGCCAGTGCA AGGTGAGGGT GGTGTTGTTC CTGCGCCAGC ATTCTGGCTG
CGAGAGTTAC GTCGTATTTG TGATGAACAC GGTATCTTAC TAATCTTCGA TGAGATCCAG
TGTGGTGTTG GTAAAACTGG CTACAATTTC GCATTTGAAG AGTCGGGAAT TGTTCCAGAT
ATCCTGTGTT TATCAAAAGC TATTGGCGGT GGCTTACCAA TGTCGCTATT GGTTATCAAC
AAGCAGCATG ATACTTGGAA GCCGGGCGAA CACACAGGTA CGTTTCGTGG CAATCAGTTA
GCCATGGTCT CTGGTGCGAA AGCATTAGAA ATCATCCAGC GTGACAATCT GGTTGAGCAC
GCCAATATTG CGGGCCAGTA TTTGCGCTAT GGTCTTGAAA GCATTCAAAA GCGCGTGAAC
TGTATCGCAG AAGTACGTGG CAAAGGCTTG ATGCTTGGTG TGGAGATTAA AAATCCAAAC
GGTGAGCTCA ATAAATTTGG CGAACCTCAA GCGGATAGTG AACTCACTCT TTCCATTCAA
CGCGCAGCAC TTGAGCGTGG CTTGATCGTT GAGAAAGGCG GACGTGAAGG CGCAGTAATT
CGCTTCCTTC CTCCTCTTAT CATCTCGTTT GAGCAAATCG ACTTTGCTTT ACGTGTATTT
GAAGACGCGA TTTTAGCCGC CGGCGGTAGT CACATCGAAA CTCAGCCACA AGATGAATGG
AAGAAGCATT TCATCCACAC TGGAGAGTTG GGCAGCAATG AGTTTGCTTC GGTGATGAAT
CACACTACGA CAGCAATGAA ATCAGTGTTT GAACAGGTTG CTGCACCATA CTCAGGTATG
GATCCAAAAG CATTGGAAGC AGCGATCCAT GCTGTTGATC TTGACAATAA AAATGCGCCT
CTCAAAACGG TTATTGATGA TGCAGCCGAG TTGGTCGCGA AAAACGCGAT TTTTACTCAA
CATCCAGATT GTATCGCTCA CCTTCATACT CCACCGTTGA TGCCTGCTAT TGCCGCAGAG
GCAATGATTG CGGCTTTGAA CCAATCAATG GACTCATGGG ATCAAGCTTC ATCAGCGACT
TATGTTGAAC AGAAAGTTGT GAACTGGCTA TGCGATAAAT ACGAGTTAGG TGGAAAAGCG
GACGGTATCT TCACGAGCGG CGGCACGCAA AGTAATCAAA TGGGTTTGAT GCTTGCGCGT
GATTGGATTG CTGACAAACT CAGTGCACAC TCAATTCAAA AGCTTGGCCT TCCTGAATAC
GCAGACAAGC TGCGTATAGT GTGTTCGAAA AAATCCCACT TCACGGTTCA AAAATCAGCG
TCTTGGATGG GATTGGGTGA AAAAGCGGTC ATGACCGTCG ATGCTAATGC CGATGGAACT
ATGGATGTCA CTAAGTTAGA CGAAGTTCTA AATCAGGCAA AAGCAGAAGG TTTGATCCCA
TTTGCAATTG TCGGCACAGC GGGTACTACG GATCACGGCG CTATTGATGA CCTAGACTTT
ATCGCCGATA TGGCAGCGAA ACATGACATG TGGATGCACG TCGACGGTGC ATACGGGGGA
GCTCTGATTC TAAGTAGCCA AAAAGCCCGT CTGAAAGGTT GTGAGCGTGC ACACTCCATC
AGCGTAGACT TCCACAAGTT GTTTTACCAA ACCATCAGTT GTGGTGCGCT GTTGGTGAAT
GACAAGTCTA ACTTTAAGTT CCTGCTTCAT CATGCAGACT ATTTGAACCG CGAGCACGAC
GAACTACCGA ACTTGGTGGA TAAGTCTATT GCTACAACTA AGCGTTTTGA TGCGCTAAAA
GTGTTTATGA CGATGCAAAG CGTGGGGCCA AAAGCCCTAG GCGATATGTA CGATCATTTG
CTTGATCAGA CGCTTGAAGT TGCGGACATG ATTCGAGATA ACAAACACTT TGAGTTGTTG
GCTGAACCAT CGCTATCTAC GGTTCTGTTC CGCGCGACAC ATGAATCAGC GGATCTTGAT
GAACTGAATA AAACGTTGCG CTTAGAAGCG TTAACACGCG GTATCGCGAT ATTGGGTGAA
ACCATTGTCG ACGGTAAAAC TGCATTGAAA TTTACGATTT TGAACCCGTG TCTGACGACG
GCGGACTTTG AATCTTTGCT CTCAAAAATC AATACGCTAG CGGCAGAGCT AGTTTAA
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| Protein sequence | MSTAFEVDSN IANIFSSQVP IVEGTYDLTP DQVLIDQAEH ESEVRSYPRR LPIAIKQAFG
CLVEDTRGQI FLDCLAGAGT LALGYNHPEI NQALKEQLDS GLPYQTLDIA TSAKTTFIQS
VKSFLPQELS ENSVIQFCGP SGADAVEAAI KLAKQTTGRN TMFAFRGAYH GMTNGTMGMM
GNLGTKARRT GLMSDVHFMP FPYNLRCPFG LGGDEGAKAS IRYIDRLLND DESGIMKPAA
IIVEPVQGEG GVVPAPAFWL RELRRICDEH GILLIFDEIQ CGVGKTGYNF AFEESGIVPD
ILCLSKAIGG GLPMSLLVIN KQHDTWKPGE HTGTFRGNQL AMVSGAKALE IIQRDNLVEH
ANIAGQYLRY GLESIQKRVN CIAEVRGKGL MLGVEIKNPN GELNKFGEPQ ADSELTLSIQ
RAALERGLIV EKGGREGAVI RFLPPLIISF EQIDFALRVF EDAILAAGGS HIETQPQDEW
KKHFIHTGEL GSNEFASVMN HTTTAMKSVF EQVAAPYSGM DPKALEAAIH AVDLDNKNAP
LKTVIDDAAE LVAKNAIFTQ HPDCIAHLHT PPLMPAIAAE AMIAALNQSM DSWDQASSAT
YVEQKVVNWL CDKYELGGKA DGIFTSGGTQ SNQMGLMLAR DWIADKLSAH SIQKLGLPEY
ADKLRIVCSK KSHFTVQKSA SWMGLGEKAV MTVDANADGT MDVTKLDEVL NQAKAEGLIP
FAIVGTAGTT DHGAIDDLDF IADMAAKHDM WMHVDGAYGG ALILSSQKAR LKGCERAHSI
SVDFHKLFYQ TISCGALLVN DKSNFKFLLH HADYLNREHD ELPNLVDKSI ATTKRFDALK
VFMTMQSVGP KALGDMYDHL LDQTLEVADM IRDNKHFELL AEPSLSTVLF RATHESADLD
ELNKTLRLEA LTRGIAILGE TIVDGKTALK FTILNPCLTT ADFESLLSKI NTLAAELV
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