| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003099 |
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| Symbol | |
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| ID | 8556828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1663160 |
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| End bp | 1664926 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406190 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_003285724 |
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| Protein GI | 262393870 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000908036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAACG CCGAAGCTGT TGTCATCTAT GTAGGTAAAG CCAAAGACCT AAAAAAGCGC
CTTTCAAGCT ACTTTCGAAA AAAAGTAGAC AGTGAGAAAA CTCGCGCGCT TGTCAGTAAT
ATCGCCAAAA TAGACGTCAC GGTGACTCAC ACTGAGACAG AAGCGCTGAT CTTAGAACAT
AACTACATCA AGCAGTATTT ACCGAAATAC AATGTGTTGC TGCGAGATGA TAAGTCTTAC
CCTTATATCT TTATTAGCGG CCATAAACAC CCACGGCTTT CTATCCACCG TGGCGCCAAG
AAGCGCAAAG GTGAATATTT TGGCCCCTAC CCAGATTCTG GTGCAGTAAG AGAAACATTG
CATTTGCTGC AAAAGATATT TCCTGTGCGC CAGTGTGAAG ACACTGTCTA TTCCAACCGA
ACGCGCCCAT GTTTGATGTA CCAAATTGGC CGTTGTGCAG GGCCATGCGT TGATACCATC
ATTTCTGATG AAGAATACGC AGAGTTGGTT GGCTTTGTGC GCATGTTTTT GCAAGGCAAA
GACCAGCAAG TACTCAAACA ACTGATCGAG AAAATGGAAG TTGCCAGTCA GCAATTGCGC
TTTGAAGATG CCGCTAAATT TCGCGATCAA ATCCAAGCGA TTAGACGTGT TCAAGAGCAG
CAGTACGTCT CAGAAGACAG CATGGATGAT ATGGATGTAC TAGGGTTTGC TCAGGAGAAT
GGTATTGCGT GTATTCATAT CCTGATGATA CGCCAAGGTA AAGTGCTTGG TAGCCGTAGC
CATTTTCCGA AAATCCCACA AAATACAAGC CAGCAGGAAG TGTTCGATAG TTTTCTGACT
CAATACTATT TGAGCCATAA CGAAGCGCGC ACGATTCCTT CTCGTATTAT TTTGAATCAA
GAGTTGGCAG AAGATATTGC GCCAATACAG AAAGCGTTAA GTGAAGTGGC AGGTCGTAAG
GTTCATTTCC ATACCTCGCC AACTGGCTCT CGAGCAAGGT ATCTCAAGCT TTCGAACACG
AATGCACTAA CGGCGATTAC CACCAAAATC AATCACAAGA TGACGATTAA TCAGCGTTTT
CATGCGCTTC GCGAAACATT GAAGTTGGAG TCTATTGCTC GAATGGAGTG TTTTGATATC
TCCCATACCA TGGGGGAAAG TACGATTGCA TCGTGTGTGG TGTTCAACAA TGAAGGCCCC
GTTAAGCAGG AGTATCGTCG CTATAACATC ACTGGCATTA CCGGTGGTGA CGATTACGCT
GCAATGGGAC AAGCGTTGGA GCGCCGTTAT TCGAAGCAAT TGGACGTAGA GAAAATTCCC
GACATCATCT TTATCGATGG TGGTAAAGGT CAGTTAAATC GTGCGCATGA CATCATTTCG
CAGTACTGGG GGGATTGGCC AAAGCGTCCT ATCATGATTG GTATTGCAAA AGGCGTTACT
CGCAAACCAG GTTTAGAAAC GCTGATTACA GTCGATGGGG ACGAGTTTCA TTTACCAAGC
GATGCTTCTG CGTTGCACCT TATTCAACAT ATTCGTGATG AAAGCCATAA CCATGCTATA
GCGGGGCATC GTGCTAAGCG AGGTAAAACC AGACGTACTA GTGCACTTGA AGGGATTGAG
GGAATTGGCC CTAAACGACG TCAGGCGTTA CTCAAGTACA TGGGTGGGTT ACAAGAACTT
AAACGTGCAA GTGTCGAAGA AATCGCCAAA GTACCGGGAA TAAGTCACTC TTTAGCAGAA
ATTATTTTCC AAGCATTGAA ACAATAA
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| Protein sequence | MYNAEAVVIY VGKAKDLKKR LSSYFRKKVD SEKTRALVSN IAKIDVTVTH TETEALILEH
NYIKQYLPKY NVLLRDDKSY PYIFISGHKH PRLSIHRGAK KRKGEYFGPY PDSGAVRETL
HLLQKIFPVR QCEDTVYSNR TRPCLMYQIG RCAGPCVDTI ISDEEYAELV GFVRMFLQGK
DQQVLKQLIE KMEVASQQLR FEDAAKFRDQ IQAIRRVQEQ QYVSEDSMDD MDVLGFAQEN
GIACIHILMI RQGKVLGSRS HFPKIPQNTS QQEVFDSFLT QYYLSHNEAR TIPSRIILNQ
ELAEDIAPIQ KALSEVAGRK VHFHTSPTGS RARYLKLSNT NALTAITTKI NHKMTINQRF
HALRETLKLE SIARMECFDI SHTMGESTIA SCVVFNNEGP VKQEYRRYNI TGITGGDDYA
AMGQALERRY SKQLDVEKIP DIIFIDGGKG QLNRAHDIIS QYWGDWPKRP IMIGIAKGVT
RKPGLETLIT VDGDEFHLPS DASALHLIQH IRDESHNHAI AGHRAKRGKT RRTSALEGIE
GIGPKRRQAL LKYMGGLQEL KRASVEEIAK VPGISHSLAE IIFQALKQ
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