Gene VEA_003099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003099 
Symbol 
ID8556828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1663160 
End bp1664926 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content45% 
IMG OID646406190 
Productexcinuclease ABC subunit C 
Protein accessionYP_003285724 
Protein GI262393870 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.08036e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAACG CCGAAGCTGT TGTCATCTAT GTAGGTAAAG CCAAAGACCT AAAAAAGCGC 
CTTTCAAGCT ACTTTCGAAA AAAAGTAGAC AGTGAGAAAA CTCGCGCGCT TGTCAGTAAT
ATCGCCAAAA TAGACGTCAC GGTGACTCAC ACTGAGACAG AAGCGCTGAT CTTAGAACAT
AACTACATCA AGCAGTATTT ACCGAAATAC AATGTGTTGC TGCGAGATGA TAAGTCTTAC
CCTTATATCT TTATTAGCGG CCATAAACAC CCACGGCTTT CTATCCACCG TGGCGCCAAG
AAGCGCAAAG GTGAATATTT TGGCCCCTAC CCAGATTCTG GTGCAGTAAG AGAAACATTG
CATTTGCTGC AAAAGATATT TCCTGTGCGC CAGTGTGAAG ACACTGTCTA TTCCAACCGA
ACGCGCCCAT GTTTGATGTA CCAAATTGGC CGTTGTGCAG GGCCATGCGT TGATACCATC
ATTTCTGATG AAGAATACGC AGAGTTGGTT GGCTTTGTGC GCATGTTTTT GCAAGGCAAA
GACCAGCAAG TACTCAAACA ACTGATCGAG AAAATGGAAG TTGCCAGTCA GCAATTGCGC
TTTGAAGATG CCGCTAAATT TCGCGATCAA ATCCAAGCGA TTAGACGTGT TCAAGAGCAG
CAGTACGTCT CAGAAGACAG CATGGATGAT ATGGATGTAC TAGGGTTTGC TCAGGAGAAT
GGTATTGCGT GTATTCATAT CCTGATGATA CGCCAAGGTA AAGTGCTTGG TAGCCGTAGC
CATTTTCCGA AAATCCCACA AAATACAAGC CAGCAGGAAG TGTTCGATAG TTTTCTGACT
CAATACTATT TGAGCCATAA CGAAGCGCGC ACGATTCCTT CTCGTATTAT TTTGAATCAA
GAGTTGGCAG AAGATATTGC GCCAATACAG AAAGCGTTAA GTGAAGTGGC AGGTCGTAAG
GTTCATTTCC ATACCTCGCC AACTGGCTCT CGAGCAAGGT ATCTCAAGCT TTCGAACACG
AATGCACTAA CGGCGATTAC CACCAAAATC AATCACAAGA TGACGATTAA TCAGCGTTTT
CATGCGCTTC GCGAAACATT GAAGTTGGAG TCTATTGCTC GAATGGAGTG TTTTGATATC
TCCCATACCA TGGGGGAAAG TACGATTGCA TCGTGTGTGG TGTTCAACAA TGAAGGCCCC
GTTAAGCAGG AGTATCGTCG CTATAACATC ACTGGCATTA CCGGTGGTGA CGATTACGCT
GCAATGGGAC AAGCGTTGGA GCGCCGTTAT TCGAAGCAAT TGGACGTAGA GAAAATTCCC
GACATCATCT TTATCGATGG TGGTAAAGGT CAGTTAAATC GTGCGCATGA CATCATTTCG
CAGTACTGGG GGGATTGGCC AAAGCGTCCT ATCATGATTG GTATTGCAAA AGGCGTTACT
CGCAAACCAG GTTTAGAAAC GCTGATTACA GTCGATGGGG ACGAGTTTCA TTTACCAAGC
GATGCTTCTG CGTTGCACCT TATTCAACAT ATTCGTGATG AAAGCCATAA CCATGCTATA
GCGGGGCATC GTGCTAAGCG AGGTAAAACC AGACGTACTA GTGCACTTGA AGGGATTGAG
GGAATTGGCC CTAAACGACG TCAGGCGTTA CTCAAGTACA TGGGTGGGTT ACAAGAACTT
AAACGTGCAA GTGTCGAAGA AATCGCCAAA GTACCGGGAA TAAGTCACTC TTTAGCAGAA
ATTATTTTCC AAGCATTGAA ACAATAA
 
Protein sequence
MYNAEAVVIY VGKAKDLKKR LSSYFRKKVD SEKTRALVSN IAKIDVTVTH TETEALILEH 
NYIKQYLPKY NVLLRDDKSY PYIFISGHKH PRLSIHRGAK KRKGEYFGPY PDSGAVRETL
HLLQKIFPVR QCEDTVYSNR TRPCLMYQIG RCAGPCVDTI ISDEEYAELV GFVRMFLQGK
DQQVLKQLIE KMEVASQQLR FEDAAKFRDQ IQAIRRVQEQ QYVSEDSMDD MDVLGFAQEN
GIACIHILMI RQGKVLGSRS HFPKIPQNTS QQEVFDSFLT QYYLSHNEAR TIPSRIILNQ
ELAEDIAPIQ KALSEVAGRK VHFHTSPTGS RARYLKLSNT NALTAITTKI NHKMTINQRF
HALRETLKLE SIARMECFDI SHTMGESTIA SCVVFNNEGP VKQEYRRYNI TGITGGDDYA
AMGQALERRY SKQLDVEKIP DIIFIDGGKG QLNRAHDIIS QYWGDWPKRP IMIGIAKGVT
RKPGLETLIT VDGDEFHLPS DASALHLIQH IRDESHNHAI AGHRAKRGKT RRTSALEGIE
GIGPKRRQAL LKYMGGLQEL KRASVEEIAK VPGISHSLAE IIFQALKQ