Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003097 |
Symbol | |
ID | 8556826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1659657 |
End bp | 1662020 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646406188 |
Product | DNA polymerase II |
Protein accession | YP_003285722 |
Protein GI | 262393868 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000122511 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATATCC AACAAGGCTT TCTGCTTACT CGACAGGCAC GAGACATCAA AGGTCAAACT CAAATCGAGC TGTGGCTTTC GACAGAAGCA GGTCCTACTC AGTTAATTAT TAATGGTGAG AAGCCAGTAT TTTTCATCGC TCAGAAACAC TCAGAGCAAG CAAAAACACT CGCGCGAGAA AAAAACATAC CCGTCGACAT CCGCCTTTTG GATCTCAAAA CGTTTGAACA TACGCCTCTT GCTGCCTGCT ATACCAATGT AACCAGAGAC GCTCTCACAC TTAAAGACAC ATTCGCTCAA AAAGATATCA CCACTTACGA AAGTGATATT CGCCTCGCCG ATCGCTACCT CATGGAGCGT TTTATTAAAG GCAGTATTGA GTTTACAGGC AATGTGACTC GTACCAATGG CTACCAACGC GTCCAGAACG CAAAATGCCG TACGGGGCAA TATGAGCCGA AGTTAAACGT TGTCTCGTTA GATCTAGAAT GCTCTGAGAA AGGCATTCTT TACTCCATCG GATTAGACAG CGTCATGGAT TCCCGCGTTA TCATGATCGG AGAACCAGAA CCTTCGGATA CACCGATACA ATGGGTCCAG GATGAAAAGG CGCTTCTAGA AGCACTCATC GATTGGTTTA AAAAATTCGA CCCCGATGTC ATTGTCGGTT GGAATGTCAT TGATTTTGAC TTTCGTCTGT TACACAAACG AGCAGAATGG CACAACATGA AACTCATGCT TGGCAGAGCA GACCAAGCCA GTTTTTTCAA AAGCTCATCT CAAAGCCAAC AAGGGTTTAT TTCCATTCCC GGGCGAGTTG TAATGGACGG TATCGATACG TTAAAAACGG CGACTTATCA CTTTCGGTCT TGGTCATTAG AGTCTGTATC TCAAGAACTC TTGGGGGAAG GTAAAGAAAT CCACAACGTT CATGACCGTA TGGATGAGAT CAATCGTATG TACCGCTCCG ACAAACCATC GCTGGCTAAA TATAACTTAC AAGACTGCGT GTTGGTGAAC AAGATTTTCA ATCACACTCA CCTGCTCGAC TTTGCAATTG AACGCTCTCG CCTCACTGGT GTAGAACTGG ATCGTGTCGG TGGCTCGGTA GCGGCATTCA CTAATTTATA CATGCCGCAA ATACACCGCG CAGGCTATGT TGCCCCGAAC CTACACCCAG AAAATTGGAT TGCGAGCCCC GGCGGTTACG TGATGGACTC CATCCCTAAC CTATATGATT CCGTTTTAGT GTTGGACTTT AAGAGTCTAT ACCCATCGAT TATTCGCTCT TTCTTGATTG ATCCTATGGG TTTGGTTGAG GGGTTATTAC TCGATATTGG TAAAGAAGAT GAGCAGGCAG TACCTGGCTT TCGCGGTGGT CAGTTCCATC GTACGAAACA CTTTTTACCA GAAATGATTG AAAAGCTATG GGCAGCACGT GATGTTGCAA AGAAGAACAA TGAAAAAGCT TTTTCTCAGG CAATCAAAAT CATCATGAAC TCCTTTTATG GCGTACTGGG CTCATCGGGA TGTCGTTTCT TTGATACTCG GTTAGCTTCT AGTATTACCA TGCGCGGACA TGAAATCATG AAGCAAACTA AGGTGCTGAT TGAGGAGCAA GGATATCAAG TGATTTACGG CGATACGGAT TCCACATTCG TGTCGTTGAA TCGACCATAC AGTCAAGTAG AAGCTGACGC TGTTGGAAAT CAATTAGTTG ATTACATCAA CTCTTGGTGG CAAGAACACC TGCGTTCTGA GTACAACCTA ACATCTATGT TGGAAATCGA GTATGAAACC CATTATCGCA GATTCCTTAT GCCAACGATT CGTGGCGCAG AAACTGGCTC GAAAAAGCGC TATGCGGGTT TAATCGGTGA AGGAAAGCAA GAACGGATTG TATTTAAAGG GTTAGAAAGT GCCCGTACTG ACTGGACCTC GTTAGCACAG AAATTTCAAA ATACACTCTA TAGCATGATT TTCCATGGTG AAGATCCAAG CGACTATGTC CGAGAGATGG TTGAGAAAAC TAACAACGGT GAATTTGATG AACAGTTGGT GTATCAAAAG CGACTGCGCA GAAAACTGCA TGAGTATCAG AAGAACGTCC CGCCACAAGT GCGTGCAGCT CGTTTAGCGG ATGAGATAAA TGCCAAGCTT GGACGCCCAT TACAGTATCA AAACAAAGGA CGAATTGAAT ACATTATAAC CGTGAACGGT CCTGAACCTT ATGAGTACCT CAATAGCCCG ATTGATTATC AACATTACAT TGATAAACAA CTCAAACCCG TTGCAGATGC GATTCTCCCT TTCATTGGGA CGGATTTTGA CAGGCTTTCA GCGCCTCAAA TGGGGTTGTT TTAA
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Protein sequence | MNIQQGFLLT RQARDIKGQT QIELWLSTEA GPTQLIINGE KPVFFIAQKH SEQAKTLARE KNIPVDIRLL DLKTFEHTPL AACYTNVTRD ALTLKDTFAQ KDITTYESDI RLADRYLMER FIKGSIEFTG NVTRTNGYQR VQNAKCRTGQ YEPKLNVVSL DLECSEKGIL YSIGLDSVMD SRVIMIGEPE PSDTPIQWVQ DEKALLEALI DWFKKFDPDV IVGWNVIDFD FRLLHKRAEW HNMKLMLGRA DQASFFKSSS QSQQGFISIP GRVVMDGIDT LKTATYHFRS WSLESVSQEL LGEGKEIHNV HDRMDEINRM YRSDKPSLAK YNLQDCVLVN KIFNHTHLLD FAIERSRLTG VELDRVGGSV AAFTNLYMPQ IHRAGYVAPN LHPENWIASP GGYVMDSIPN LYDSVLVLDF KSLYPSIIRS FLIDPMGLVE GLLLDIGKED EQAVPGFRGG QFHRTKHFLP EMIEKLWAAR DVAKKNNEKA FSQAIKIIMN SFYGVLGSSG CRFFDTRLAS SITMRGHEIM KQTKVLIEEQ GYQVIYGDTD STFVSLNRPY SQVEADAVGN QLVDYINSWW QEHLRSEYNL TSMLEIEYET HYRRFLMPTI RGAETGSKKR YAGLIGEGKQ ERIVFKGLES ARTDWTSLAQ KFQNTLYSMI FHGEDPSDYV REMVEKTNNG EFDEQLVYQK RLRRKLHEYQ KNVPPQVRAA RLADEINAKL GRPLQYQNKG RIEYIITVNG PEPYEYLNSP IDYQHYIDKQ LKPVADAILP FIGTDFDRLS APQMGLF
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