| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003020 |
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| Symbol | |
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| ID | 8556750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1570926 |
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| End bp | 1572596 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406113 |
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| Product | SSU ribosomal protein S1p |
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| Protein accession | YP_003285647 |
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| Protein GI | 262393793 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000113511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT CTTTTGCTCA ACTCTTTGAA GAGTTTCTAA ACGAAACAGA ATTCCAACAA
GGCAGCATCG TTAAAGGTAC TGTAGTAGCT ATCGAGAACG GTTTCGTTCT TGTTGACGCT
GGTCTTAAGT CTGAATCTGC TATCCCTGCT GAACAGTTCA AGAACGCTGC TGGCGAACTT
GAAGTTGAAG TTGGCGCTGA AGTAGACGTA GCTCTAGACG CTGTTGAAGA TGGTTTCGGT
GAAACTCAAC TTTCTCGTGA GAAAGCTAAG CGTCACGAAG CTTGGATCGT ACTTGAGAAA
GCTTACGAAG AAGCTGAAAC TGTTGTTGGT ATCATCAACG GTAAAGTTAA AGGCGGTTTC
ACTGTTGAAC TAAACGGTAT CCGTGCTTTC CTTCCTGGCT CTCTAGTAGA CGTACGTCCA
ATCCGCGACA CTGCTCACCT AGAAAACAAA GAGCTAGAGT TCAAAGTTAT CAAACTTGAC
CAAAAACGTA ACAACGTAGT TGTTTCACGT CGTGCTGTTA TCGAATCTGA AAACAGCGTT
GAGCGTGACG AGCTTCTAGA AACTCTACAA GAAGGTTCTG AAGTTAAAGG TATCGTTAAG
AACCTTACTG ACTACGGTGC GTTCGTTGAC CTAGGTGGCG TTGACGGTCT TCTACATATC
ACTGATATGG CTTGGAAGCG CGTTAAGCAC CCATCTGAAA TCGTTAACGT TGGTGACGAG
ATCCAAGTTA AAGTTCTTAA GTTCGACCGT GAGCGTACTC GCGTATCACT AGGTCTTAAG
CAACTAGGCG AAGATCCATG GGTAGCAATC GCTAAGCGTT ACCCAGAAGG TCACAAACTA
ACTGGTCGCG TAACTAACCT AACTGACTAC GGCTGCTTCG TTGAAATCGA AGAAGGCGTT
GAAGGTCTAG TTCACGTTTC AGAAATGGAT TGGACTAACA AGAACATCCA CCCTTCTAAA
GTTGTTAATG TTGGCGACGA AGTTGAGGTT ATGGTTCTTG AAATCGACGA AGAACGTCGT
CGTATCTCTC TAGGTCTGAA ACAGTGTAAA GCTAACCCAT GGCAGTCATT CGCTGAAGCA
CAAGCTAAAG GCGACAAAGT TACTGGTAAG ATCAAGTCTA TCACTGACTT CGGTATCTTC
ATCGGTCTAG AAGGCGGCAT CGACGGTCTA GTTCACCTAT CTGACATTTC TTGGAATGTT
GCTGGCGAAG AAGCTGTACG TGAGTACAAG AAAGGCGACG AGATCTCTGC AGTTGTTCTA
GCAGTAGACG CTGAGCGTGA GCGCATCTCT CTAGGCATCA AGCAAATGGA AAACGACCCA
TTCAATGCTT ACGTTGCTGA CAACAAGAAA GGTGTTCTAG TTAACGCTAC TGTAACTGCT
GTTGACGCTA AAGGCGCTAC TGTTGAAATC GCAGAAGGCG TTGAAGGTTA CATCCGTGCT
TCTGAAGTAT CTCGCGATCG CGTAGAAGAT GCTTCTCTAA TCCTAAGCGC TGGTGATGTT
GTTGAAGCGA AGTTCACAGG TGTAGACCGT AAGAACCGCG TAATCAACCT ATCTATCAAA
GCTAAAGACG AAGCTGACGA GCAAGAAGCA ATGGCATCTA TCAACAAGCA AGATGACAAT
GCATTCGGTA ACGCAATGGC TGACGCTTTC AAAGCTGCTA AAGGCGAATA A
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| Protein sequence | MTESFAQLFE EFLNETEFQQ GSIVKGTVVA IENGFVLVDA GLKSESAIPA EQFKNAAGEL
EVEVGAEVDV ALDAVEDGFG ETQLSREKAK RHEAWIVLEK AYEEAETVVG IINGKVKGGF
TVELNGIRAF LPGSLVDVRP IRDTAHLENK ELEFKVIKLD QKRNNVVVSR RAVIESENSV
ERDELLETLQ EGSEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
IQVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPEGHKL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNVGDEVEV MVLEIDEERR RISLGLKQCK ANPWQSFAEA
QAKGDKVTGK IKSITDFGIF IGLEGGIDGL VHLSDISWNV AGEEAVREYK KGDEISAVVL
AVDAERERIS LGIKQMENDP FNAYVADNKK GVLVNATVTA VDAKGATVEI AEGVEGYIRA
SEVSRDRVED ASLILSAGDV VEAKFTGVDR KNRVINLSIK AKDEADEQEA MASINKQDDN
AFGNAMADAF KAAKGE
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