Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003000 |
Symbol | |
ID | 8556730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1547858 |
End bp | 1548874 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646406093 |
Product | hypothetical protein |
Protein accession | YP_003285627 |
Protein GI | 262393773 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0577137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTAAAA AACTGTTGGC TTTTGTTGTG CTGATCGCAG TGATAGGCGC AGCAGCTGTT TTTTATATAA TTTCACAGGC TAAACAATAC GTTGAAAAGC CTATTCTATT GGAACAACCT CAGCTGTTTA CTGTAGAAAG TGGTACAAGC TTTCATCATG TCATGCGCGC CTTAGTTGAA GATGAGGTAA TTGAAACGTC GGAGTACATC CGTTTAATAC CTCACTTATA TCCAGAACTG TTGCAAGTAC GAGCGGGCAC TTATCAACTA GAGCCTGGTA TGTCGCTTTC GCAAGCATTG GAGCACCTGA ACACCGGAAA AGAATACCAG TTTGCGATCA CTTTTGTTGA AGGCAACCGC TTTTCTGAGT GGGTAGAGCA ATTGAAAAGT GCTCCTTATT TAGAGCATGA CTTAACCGAT CTACCAGAAA AAGACATGGC AGCAAAGTTG GGTATTGAGC GAGAAAAGCT TGAAGGACTG TTTTTAGCAG AAACCTACCA TTACACGGCG GGTGCAAGTG AAAGCCAGTT ATTAAAACGA GCGCATCGAA AACTCAATAA GATTCTGGAT GCTAACTGGG AAGCTCGTCA AGAAAAGCTG CCATTGCAAG ACAAATATGA AGCCTTGATT CTGGCGTCTA TCATCGAGAA AGAGACGGCC ATTGACTCTG AGCGTGAGCG CGTCGCTTCT GTGTTTATCA ACCGATTGAA CAAACGCATG CGTTTACAAA CGGATCCGAC GGTTATTTAT GGTATGGGTG ATGCTTACGA CGGAAATATT CGTAAGAAAG ATTTGCGCAC GCCGACACCA TATAACACCT ATACCATCAA TGGCTTACCT CCAACCCCAA TTGCGATGGC AGGTGAAGCC TCTATTGAAG CGGCTTTGAA TCCAGAAAGC AGCAACTATT TATATTTCGT AGCAAGTGGA AAGGGCGGAC ACGTATTTTC GAAATCCCTT GCAGAGCACA ATCGTGCTGT TCGAGCCTAT TTAAGAGAAC TAAGAAAGAA CAAATGA
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Protein sequence | MIKKLLAFVV LIAVIGAAAV FYIISQAKQY VEKPILLEQP QLFTVESGTS FHHVMRALVE DEVIETSEYI RLIPHLYPEL LQVRAGTYQL EPGMSLSQAL EHLNTGKEYQ FAITFVEGNR FSEWVEQLKS APYLEHDLTD LPEKDMAAKL GIEREKLEGL FLAETYHYTA GASESQLLKR AHRKLNKILD ANWEARQEKL PLQDKYEALI LASIIEKETA IDSERERVAS VFINRLNKRM RLQTDPTVIY GMGDAYDGNI RKKDLRTPTP YNTYTINGLP PTPIAMAGEA SIEAALNPES SNYLYFVASG KGGHVFSKSL AEHNRAVRAY LRELRKNK
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