| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002950 |
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| Symbol | |
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| ID | 8556680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1490041 |
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| End bp | 1492071 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406043 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_003285577 |
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| Protein GI | 262393723 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000433983 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAG TCTATGAATT GGTCTCCGAT TATCAGCCAT CGGGTGACCA GCCGGGAGCG
ATCAAGCAGC TGCTTGAGGG GCTCGATGCT GGACTGGCAC ATCAAACACT ATTGGGGGTA
ACGGGATCGG GTAAAACGTT CACACTAGCG AATGTTATCG CTCAAGCCCA ACGACCTGCA
ATATTACTTG CTCCAAACAA AACGCTCGCA GCGCAATTAT ATGGCGAGAT GAAATCATTC
TTTCCCAATA ATGCGGTGGA GTACTTTGTT TCCTACTACG ATTACTACCA GCCTGAAGCT
TATGTCCCGA CGACGGATAC TTTCATTGAA AAAGACGCAT CGGTTAACGC TCACATAGAG
CAAATGCGCC TTTCCGCAAC GAAAGCACTA TTGGAACGTA AAGACGCGAT TATCGTTGCG
TCTGTTTCTG CTATCTATGG TTTGGGTGAC CCAGAATCTT ACTTGCAAAT GATGTTGCAT
TTACGTCGTG GTGACGTGAT TGATCAACGG GACATGCTAC GACGTTTGGC AGAGCTACAA
TATTCGAGAA ATGACGTGGC ATTTGAGCGA GGGCAGTTTC GGGTTCGTGG CGAAGTGATT
GATATCTTTC CAGCGGAATC TGACCAAGAC GCAGTTCGTG TCGAAATGTT TGATGATGAA
ATTGACTGCA TCAGTGTTTT TGACCCATTG ACTGGTGTGG TGAAACAGCG AGATTTACCA
CGCTACACCA TTTATCCTAA GACGCACTAC GTGACACCAA GAGATCGCAT TCTTGAAGCG
ATTGAAAATA TTAAGGTTGA ATTAGAAGTA CGCAAAAAAC AGCTTCTAGA CAACAACAAG
CTACTGGAAG AACAGCGTAT TAGCCAGCGG ACTCAATTCG ATATCGAGAT GATGAATGAG
TTAGGTTTTT GCTCAGGTAT CGAAAACTAT TCTCGCTATC TCAGCGGACG ATTGGAAGGC
GAGCCGCCAC CGACATTGTT TGATTACTTG CCTCATGACG GTTTGTTGAT CATCGATGAA
TCTCACGTGA CGGTGCCGCA GATTGGTGCC ATGTATAAAG GTGACCGCTC TCGTAAAGAA
ACACTGGTGG AGTTTGGTTT TCGCTTACCT TCTGCGTTAG ATAATCGTCC CCTCAAGTTT
GAAGAGTTTG AAGCGTTAGC ACCGCAGACG ATTTTTGTCT CTGCGACGCC AGGAAATTAT
GAACTAGAAA AATCGGCTGG TGATGTAGCG GATCAAGTTG TTCGTCCAAC AGGCTTGCTT
GACCCAGAAT TGGAAGTTCG CCCAGTAGCG ACCCAAGTAG ACGACTTGTT GTCTGAAATT
CGTCTCCGTT CTGCTAAAGA TGAGCGAGTT CTAGTGACAA CATTGACCAA ACGGATGGCC
GAAGATCTCA CTGAGTACTT GCACGAACAT GATGTTAGGG TACGTTACTT ACACTCAGAT
ATTGATACCG TAGAACGTGT GGAGATCATC CGTGATCTTC GTCTTGGCGA GTTTGACGTG
CTGGTGGGAA TTAACTTGCT ACGAGAAGGC TTGGACATGC CTGAAGTTTC GCTGGTTGCA
ATATTGGATG CAGATAAAGA GGGCTTCTTG CGCTCCGAGC GTTCACTGAT TCAGACCATT
GGTCGTGCTG CGCGAAATCT TGAAGGTAAG GCGATTTTGT ATGCTGACCG AATCACCAAC
TCCATGAAAA AGGCGATGGA TGAAACCAAC CGCCGCCGCG AGAAGCAGAA AGCGTACAAC
GAAGAAATGG GCATTTCGCC GCAAGCGCTC AAACGAAATA TCAAAGATAT TATGGAATTG
GGCGATATTA CCAAGTCTAA ACGTCAGCGT AATACTAAAC AGGTACCGTT GTCGAAAGTG
GCGGAGCCTT CGCAAACATA CGAGGTCATG TCTCCTCAAC AGTTGGAAAA AGAAATCAGT
CGACTTGAGG CGGCAATGTA TCAGCACGCG CAAGATTTAG AGTTTGAATT AGCGGCGCAA
AAGCGTGACG AGATTGAAAA ACTAAGAGCG CAGTTCATCG CAAATAGTTA A
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| Protein sequence | MSKVYELVSD YQPSGDQPGA IKQLLEGLDA GLAHQTLLGV TGSGKTFTLA NVIAQAQRPA
ILLAPNKTLA AQLYGEMKSF FPNNAVEYFV SYYDYYQPEA YVPTTDTFIE KDASVNAHIE
QMRLSATKAL LERKDAIIVA SVSAIYGLGD PESYLQMMLH LRRGDVIDQR DMLRRLAELQ
YSRNDVAFER GQFRVRGEVI DIFPAESDQD AVRVEMFDDE IDCISVFDPL TGVVKQRDLP
RYTIYPKTHY VTPRDRILEA IENIKVELEV RKKQLLDNNK LLEEQRISQR TQFDIEMMNE
LGFCSGIENY SRYLSGRLEG EPPPTLFDYL PHDGLLIIDE SHVTVPQIGA MYKGDRSRKE
TLVEFGFRLP SALDNRPLKF EEFEALAPQT IFVSATPGNY ELEKSAGDVA DQVVRPTGLL
DPELEVRPVA TQVDDLLSEI RLRSAKDERV LVTTLTKRMA EDLTEYLHEH DVRVRYLHSD
IDTVERVEII RDLRLGEFDV LVGINLLREG LDMPEVSLVA ILDADKEGFL RSERSLIQTI
GRAARNLEGK AILYADRITN SMKKAMDETN RRREKQKAYN EEMGISPQAL KRNIKDIMEL
GDITKSKRQR NTKQVPLSKV AEPSQTYEVM SPQQLEKEIS RLEAAMYQHA QDLEFELAAQ
KRDEIEKLRA QFIANS
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