| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002946 |
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| Symbol | |
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| ID | 8556675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1484094 |
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| End bp | 1485140 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646406038 |
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| Product | electron transport complex protein RnfD |
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| Protein accession | YP_003285573 |
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| Protein GI | 262393719 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.892545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGTTTT TTATTGCCAG TTCACCGCAT ACCCACAGCC GTCGTAGCAC ACCTGACTTA
ATGAAATGGG TGGCACTTTG TGCTCTCCCA GGTTTAGCGG CTCAGACCTA CTTCTTTGGG
TGGGGAACGC TTATTCAACT GATTTTTGCC ATCGCAGTCG CTGTATCACT TGAAGCCTTA
GTTATGGTAT TCCGTAAACG TTCGCCGATG CGAGCACTAC GTGATAACAG TGCGATCGTT
ACCGCTTGGT TATTAGCCGT TGCTATCCCA CCATGGTCTC CGTGGTGGAT TATGGTGATC
GGACTTATTT TCGCGATTGT AATCGCTAAA CACCTATATG GTGGCCTTGG TCAAAACTTA
TTCAATCCTG CCATGGTCGC TTATGTGGTC TTGTTGATCT CATTCCCAGT GCAAATGACG
AGTTGGAGTG CCCCGACGTC ACTCATACCT GATCACGTAA ATTTTGCAGA TACACTCTCT
TTAATTTTTA CGGGCTATGA TTACGACGGC TTATCGCTTC AGCAAGTTCG AACGGGGGTT
GACGGTGTGA CAATGGCGAC GCCACTTGAT GCATTTAAGA CCGGCATTCA TACAGGTGCA
ACCCCAAGCG AAGTACTGTC GCAGCCAATA TTCGATGGAT TAGCTGGCAT TGGTTGGCAA
TGGGTAAATC TTGCCTACTT ACTTGGTGGT TTAGTGATGA TCAAAAAACG CATCATCCAA
TGGTATATCC CCGTAGGCTT CCTAGCGAGC CTGACGCTAT TTAGCCTCGT GTTCAGCTTG
CTGACCCCAG GGGAAACTGC GTCGCCAATC TTCCACTTGT TATCAGGTGC AACCATGCTT
GGCGCATTCT TTATTGCAAC CGATCCCGTG TCGGCGTCTA CCACCGTTAA AGGACGTTTG
ATCTTTGGCG CGCTTATTGG TGCTTTGGTC TTTATCATTC GCAGTTGGGG CGGCTTCCCT
GATGGTGTTG CATTCGCAGT GTTACTTGCA AATATGTGTG TGCCACTGAT CGATTACTAC
ACCAAACCTA GAACTTACGG TCACTGA
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| Protein sequence | MSFFIASSPH THSRRSTPDL MKWVALCALP GLAAQTYFFG WGTLIQLIFA IAVAVSLEAL
VMVFRKRSPM RALRDNSAIV TAWLLAVAIP PWSPWWIMVI GLIFAIVIAK HLYGGLGQNL
FNPAMVAYVV LLISFPVQMT SWSAPTSLIP DHVNFADTLS LIFTGYDYDG LSLQQVRTGV
DGVTMATPLD AFKTGIHTGA TPSEVLSQPI FDGLAGIGWQ WVNLAYLLGG LVMIKKRIIQ
WYIPVGFLAS LTLFSLVFSL LTPGETASPI FHLLSGATML GAFFIATDPV SASTTVKGRL
IFGALIGALV FIIRSWGGFP DGVAFAVLLA NMCVPLIDYY TKPRTYGH
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