Gene VEA_002938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002938 
Symbol 
ID8556667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp1479112 
End bp1479756 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content44% 
IMG OID646406030 
Productribonuclease T 
Protein accessionYP_003285565 
Protein GI262393711 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000000394372 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATAG AAAATGAAGC TCTGACCTTG AAAAAACGCT TTCGTGGTTA TTTCCCTGTG 
GTAGTAGACG TTGAGACCGC AGGTTTCAAT GCTCAAACTG ATGCACTTTT AGAAATTTGC 
GCCGTTACGT TAAAAATGGA CGAAGATGGC GTGTTGCATC CAGCCTCCAC CATTCATTTT 
CATGTTGAGC CATTTGAGGG CGCTAACTTA GAAAAAGAAG CGCTAGAATT CAATGGTATT 
CGTGACCCAT ATAGCCCTCT TCGTGGTGCA GTTTCTGAGC AAGAAGCGTT AAAAGAGATT 
TATAAACTTA TTCGCAAAGA ACAAAAAGCC GCAGATTGCT CGCGCGCAAT TATGGTTGCC 
CATAACGCAG CATTCGACTT AGGTTTTGTA AATGCAGCCA ATGAGCGCTG TAAACTAAAA 
AGAGTCCCTT TTCATCCCTT TGCTACTTTT GACACGGCAA CATTGAGCGG CCTTGCTTAT 
GGTCAAACGG TTCTCGCGAA AGCATGCAAA ACGGCCGGGA TGGAATTCGA TAATCGTGAA 
GCACACTCAG CGCTTTACGA TACACAAAAA ACAGCAGAAT TATTCTGCGG CATTGTCAAC 
AAATGGAAGG CCCTCGGCGG TTGGCCGCTT GTTGACGAAG AATAA
 
Protein sequence
MTIENEALTL KKRFRGYFPV VVDVETAGFN AQTDALLEIC AVTLKMDEDG VLHPASTIHF 
HVEPFEGANL EKEALEFNGI RDPYSPLRGA VSEQEALKEI YKLIRKEQKA ADCSRAIMVA 
HNAAFDLGFV NAANERCKLK RVPFHPFATF DTATLSGLAY GQTVLAKACK TAGMEFDNRE 
AHSALYDTQK TAELFCGIVN KWKALGGWPL VDEE