| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002927 |
|---|
| Symbol | |
|---|
| ID | 8556656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1466171 |
|---|
| End bp | 1467604 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646406019 |
|---|
| Product | Na+/H+ antiporter NhaC |
|---|
| Protein accession | YP_003285554 |
|---|
| Protein GI | 262393700 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1757] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0434616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAG TTACACCACG CCTACCAAGC TTGATACAGG TATTTATCTC GCTCGGTTTA
TTTCTACTGC TGGCATTTTC GTTCACTGCC AAGCTAGACC TACCGATCCA GCTAGCGCTG
TACATCGGTT GGTTCATTAT CATGATATTA GGCATTAAGC TTGGTCATCA GTACAAAGAT
CTGGAAAAAG CTGCACTAAA TGGCATTTCC AATGGACTTG GAGCCGTCTT AATTCTTCTT
GCCGTTGGCG CGCTTGTTGG TACGTGGATC TCTGGTGGTA TTGTTCCAAC CATCATTTAC
TACGGCCTTA AAGCAATTCA CCCTTCTATC TTTTTGCTCG CAACCATGAT CATCTGTTCA
TTGACTGCGC TAGCGACTGG CACCTCTTGG GGCGCTGCTG GTACTGCTGG TATTGCGATG
ATGGGTATTG GCCAAGGCCT TGGTGTTCCT GCGCCAATCA CTGCAGGTGC CGTACTTTCA
GGCTGTTACT TTGGTGACAA AATGTCGCCT CTCTCGGATT CAGTAATCCT TGCTTCATCT
ATGTCTAACG TTGAAGTGAT GGAACATATT AAAGGCATGT TGCCGATAGC ACTCATTAGC
TACATTATTA CAGGCATTAT GTTTACTGCA TTTGGCTTCC ACTACGCAGG TCAAGTTGAC
ATGAGCCAGG TAGACTCTGT CATTAAGGCG ATGGAACAGC AGTTCTACAT CACCCCTTAC
TCATTTGTTC CTGTGATCAT CGTATTGTCA CTTCTAGCGA TGCGTATGCC TTCATTCCCA
GTGATCAGTT TTGGTTCTCT GCTAGGTATT ATTTGGGCAG TGATGATCCA AGATGTCGAT
TTCCTAACCG CGTTCAACAC GGCTTGGGCT CCGTTTGCAA TCTCATCTGG CGTAGATTTC
ATTGACTCAA TCCTTAACCG TGGCGGCATG TCTTCAATGC TTGGGTCGGT AGCGGTTATC
GTATTCGGCC TTGGTTTTGG CGGTCTACTA GATAAAGTAG GCGTGCTAGA GACTATCGCG
AAGCTGTTTG AAAAACGCGT TCAAAGTGCA GGTTCATTGG CAACAAGCAC AATTGGTACG
GCCTTTATGG GCAACGTATT TGGTTCAGCG ATGTACGTTT CACTTATTCT GACCCCAAAA
ATCTGTGCGA AGAACTACGA CCGTCTAGGC TACAAACGTA AGAATTTGTC TCGTAACGCA
GAGTTCGGCG GCACATTAAC ATCTGGTATG GTTCCATGGA GTGACAATGG TATCTACATG
GCAAGTATTC TGGGTGTTGC GACACTATCT TACGCACCGT TCATGTGGCT AAGCTTTGTA
TGTATCATCG TGACTATCAT CAGCTCCTAC ATGGGTTGGT TTGTTGATAA ATGCGAACCA
ACAGCGGAAG CAGTTGAACA AGCAGAAGGT GAACTGAAGC AGCAAACCGC TTGA
|
|---|
| Protein sequence | MKQVTPRLPS LIQVFISLGL FLLLAFSFTA KLDLPIQLAL YIGWFIIMIL GIKLGHQYKD
LEKAALNGIS NGLGAVLILL AVGALVGTWI SGGIVPTIIY YGLKAIHPSI FLLATMIICS
LTALATGTSW GAAGTAGIAM MGIGQGLGVP APITAGAVLS GCYFGDKMSP LSDSVILASS
MSNVEVMEHI KGMLPIALIS YIITGIMFTA FGFHYAGQVD MSQVDSVIKA MEQQFYITPY
SFVPVIIVLS LLAMRMPSFP VISFGSLLGI IWAVMIQDVD FLTAFNTAWA PFAISSGVDF
IDSILNRGGM SSMLGSVAVI VFGLGFGGLL DKVGVLETIA KLFEKRVQSA GSLATSTIGT
AFMGNVFGSA MYVSLILTPK ICAKNYDRLG YKRKNLSRNA EFGGTLTSGM VPWSDNGIYM
ASILGVATLS YAPFMWLSFV CIIVTIISSY MGWFVDKCEP TAEAVEQAEG ELKQQTA
|
|---|
| |