| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002820 |
|---|
| Symbol | |
|---|
| ID | 8556548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 1348915 |
|---|
| End bp | 1350786 |
|---|
| Gene Length | 1872 bp |
|---|
| Protein Length | 623 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646405911 |
|---|
| Product | flagellar hook-length control protein FliK |
|---|
| Protein accession | YP_003285447 |
|---|
| Protein GI | 262393593 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3144] Flagellar hook-length control protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTGA ATTTGTCCAA TGTTTCTGCG ACGAGCAAGA CGTCAGTTTC TGACTCTGCC
GCACAAGCAC CTACAGAAAA CGCGGAGAAC AAGGGATTTT TGGAAACCTT GACGGATGCA
TTTTCAGGTT CACAAAAGTC AGAAAAAGTA GCAACGAAAT CACAAAACGG TGAAGAACAA
AACAGTGCCG AGGTTAACAA GCTTTCGTCT GGCAAAGCTG ATAGTCAAGA AGCGGTCACA
GATGTGGCTC AAGCGAGCAG TAACGACGCC AAAGAGTTGC TGGCGGATAC TGCTATTCAA
GAGCAAAGCC GCTCTGGCGA CATGCTGACA GAGCATGCGA ACACCATTCA AAGTGATGAA
GCAAGCCTAC TGGAAGCCAA ACAAGGCGCG CACTCGCAAA ATGATGCTGA TGTCTCTGAG
AAAGTAGGTT CACTCTCTAA CACCCCTTCA GTTGCTAATG GCGCAAAAAG CGCGATGGGT
GAAGGACAAC AGCTGCTTGG TCGTATTGAA CAAGCGAATC AAACCTTGAA AGCGAATAAT
GCATCCATCG ATAGTGGCAA AGTTTTGCCT CAACGAGCGG GTTTAGAACA CTCGTTCAAC
GGGCAAGCAA CAGACATTGA TGAACTTGCT TTGAATGACA TGCCATTAGC TCAATCGCTT
GAACAAGTGC AGGCAATGGC TGGGCAAGGC TTAGAGCCAA TTTTAGATAA GAATGGTCAA
CCTATCGATG TCGATAAGCT CTCGTCTGAG TTTGCTACTT GGCAAGGTCT GGCTAAACAA
GTCAGTCACC CAACCGAGAA GGGCATGGTC AGTGGTGACG TTGCCAATGA ACTATCGCCA
CTGGAGATGG GTTTGGATGG CTCTAAAATT GATGGGCTTC AGCGTGTTTC TTTGGATGAA
CTCGAACTCA TAGATACCAA ACTGGCGCAG GGAAAACCAC TGACTCAGCA AGAAACAGAG
ATCATAGAAG GGTTGAAAAA AGGGACGGTC ATTGCCGATA TTCCTGAGCA AGATCTTGCC
CAGTTTGTTG CGCTTCCTAC TGACGTTAAA CAGGTTCTCG CCGAGCAGCA AGTACAACAT
CATTTGGCTC GCCAGGCTGC GCCTATGGGG ATGTCTCAGC AAGCCCTTAA TTTTGCGCCT
CAATCAGCTC AGCCACAAGC TGTTCAGAGT ACAGATAAAG TCGCATTATC TCCGATGACA
GATGCGTTGG CCGCAGCTCA TTTTCCGACG GCGCTTCAAG GCGTAAAGGA CGGAGAGGTT
AACCAGAAAG TTGTGAATGC CGCATTGGCT GCTGGTGCAC TTAAAGCGAC AGCGGATAAG
CAAGATAAAC CAGAACTTCA ACATGGTTTA GCTGGGCAGC TTCAGGCGAT GGCGGGTCAA
CAAGGAACAA ACGTGCAGCA ACAAGCGCGT ATTGATGCCG CGCAGCAAGC TCAGCTTCCG
TTGCAACTGA CCAAAGAGTT GGCCAATGAG CAAGTGGCGG AAAAAGTGCA AATGATGATG
TCGAAGAACC TAAAAAACCT CGATATTCGT CTTGATCCAC CAGAATTAGG TCGTATGCAA
ATTCGTATGA CGATGAACAA CGATGTGGCT AATGTGCATT TTACGGTGAA CAACCCGCAA
GCGCGTGACA TCATTGAACA GACACTTCCT CGCTTGAGAG AGATGTTGGC GCAGCAGGGC
ATGCAACTGG CTGATTCTTC TGTTCAGCAA CAAAACAGCG GGCAGCAGCA AGGTAGGTAT
ACTGCTGAGC AACATGGTCA AAGCGCTCAA GGCAGCGGTT TTTCTGGACA ACCAGAAGAG
AGCTTTGATG CTGACGTCAA TCTGGATTTG AATGTGGCTT CAAAGCGTGA TGGAATTAGC
TTTTACGCAT AA
|
|---|
| Protein sequence | MNVNLSNVSA TSKTSVSDSA AQAPTENAEN KGFLETLTDA FSGSQKSEKV ATKSQNGEEQ
NSAEVNKLSS GKADSQEAVT DVAQASSNDA KELLADTAIQ EQSRSGDMLT EHANTIQSDE
ASLLEAKQGA HSQNDADVSE KVGSLSNTPS VANGAKSAMG EGQQLLGRIE QANQTLKANN
ASIDSGKVLP QRAGLEHSFN GQATDIDELA LNDMPLAQSL EQVQAMAGQG LEPILDKNGQ
PIDVDKLSSE FATWQGLAKQ VSHPTEKGMV SGDVANELSP LEMGLDGSKI DGLQRVSLDE
LELIDTKLAQ GKPLTQQETE IIEGLKKGTV IADIPEQDLA QFVALPTDVK QVLAEQQVQH
HLARQAAPMG MSQQALNFAP QSAQPQAVQS TDKVALSPMT DALAAAHFPT ALQGVKDGEV
NQKVVNAALA AGALKATADK QDKPELQHGL AGQLQAMAGQ QGTNVQQQAR IDAAQQAQLP
LQLTKELANE QVAEKVQMMM SKNLKNLDIR LDPPELGRMQ IRMTMNNDVA NVHFTVNNPQ
ARDIIEQTLP RLREMLAQQG MQLADSSVQQ QNSGQQQGRY TAEQHGQSAQ GSGFSGQPEE
SFDADVNLDL NVASKRDGIS FYA
|
|---|
| |