| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002806 |
|---|
| Symbol | |
|---|
| ID | 8556534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 1334015 |
|---|
| End bp | 1335145 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646405897 |
|---|
| Product | flagellin protein flaA |
|---|
| Protein accession | YP_003285433 |
|---|
| Protein GI | 262393579 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.938557 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTA ACGTTAATAC TAACGTTTCT GCGATGACTG CACAGCGTTA CCTAAACCAG
GCAGCTGACG GTCAACAAAA ATCAATGGAG CGTTTGTCTT CGGGTTATAA AATCAATAGC
GCGAAAGACG ATGCTGCAGG TCTACAGATT TCAAACCGCT TGAATGCACA AAGCCGTGGC
CTAGACATGG CGGTGAAAAA CGCAAACGAC GGTATTTCTA TTGCACAGGT TGCTGAAGGT
GCAATGAATG AATCTACCAA CATCCTACAA CGTATGCGTG ACCTATCGCT TCAATCTGCG
AACGGTTCTA ACTCAAAAGC AGAACGTGTT GCGATCCAAG AAGAAGTAAC AGCGCTAAAT
GACGAGCTAA ACCGTATTGC TGAAACTACC TCTTTCGGTG GTAACAAGTT GCTAAACGGT
ACATACGGTA CGCAATCTTT CCAAATCGGT GCAGACTCAG GTGAAGCAGT GATGCTTTCT
ATGGGTAGCT TGCGCTCAGA CACTTCTGCA ATGGGTGGCA AGAGCTACGC AGCAGAAGAG
GGTAAAGATG CATCTTGGAC TGTTGGTGAG AAAACTGAGT TCAAAATGAG CTACACCAAC
AAACAAGGTG AAGAGAAAGA GCTATCGATC AGCGCAAAAC AAGGCGACGA CATTGAGCAG
CTAGCAACGT ACATCAACGG TCAAAACGAT GATGTAAAAG CGTCTGTTGG TGAAGATGGT
AAACTACAAG TATTTGCTTC TTCTCAAAAA GTTCAAGGTG ATGTTGAGTT CTCTGGCAAC
CTAGCGGACG AGATCGGCTT TGGTGGCCCG AAAGACGTAA CAGTGAAAGA CATCGACGTA
ACAACAGTAG CAGGCTCTCA AGAAGCCGTG GCTGTTATCG ACGGTGCGCT TAAGTCAGTA
GACAGCCAAC GTGCGTCACT TGGTGCTTTC CAAAACCGCT TCAACCACGC AATCAGCAAC
CTAGACAACA TTAACGAGAA CGTTAATGCG TCTAACAGCC GTATTAAAGA TACTGATTAC
GCGAAAGAAA CCACTGCGAT GACTAAGTCG CAAATTCTTC AGCAAGCAAG TACTTCAATC
CTGGCTCAAG CGAAGCAGTC TCCATCTGCA GCGCTAAGCT TGTTGGGCTA A
|
|---|
| Protein sequence | MAINVNTNVS AMTAQRYLNQ AADGQQKSME RLSSGYKINS AKDDAAGLQI SNRLNAQSRG
LDMAVKNAND GISIAQVAEG AMNESTNILQ RMRDLSLQSA NGSNSKAERV AIQEEVTALN
DELNRIAETT SFGGNKLLNG TYGTQSFQIG ADSGEAVMLS MGSLRSDTSA MGGKSYAAEE
GKDASWTVGE KTEFKMSYTN KQGEEKELSI SAKQGDDIEQ LATYINGQND DVKASVGEDG
KLQVFASSQK VQGDVEFSGN LADEIGFGGP KDVTVKDIDV TTVAGSQEAV AVIDGALKSV
DSQRASLGAF QNRFNHAISN LDNINENVNA SNSRIKDTDY AKETTAMTKS QILQQASTSI
LAQAKQSPSA ALSLLG
|
|---|
| |