Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002788 |
Symbol | |
ID | 8556516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1319060 |
End bp | 1320511 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405879 |
Product | zinc metalloprotease |
Protein accession | YP_003285415 |
Protein GI | 262393561 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAC GCACTCGCTC GCTAGTTTGC TTATGTCTTG CAGCTGCAAT CAGTTCGCCG ACAACTTATG CCAATAGCAT TGACTTGCCA GACATTGGCA CGGCTGCTGG TGGCACGCTC TCAATAGACC AAGAGTTGAT TTACGGCGAC GCCTATATGC GTATGCTCAG AGCCAGTAAA CCTATCGTTA ATGATCCTGT TATCAATGAA TATATTGACG CTCTCGGGCA CAGACTAGTA GCCAATGCGA ACGATGTGAA AACGCCGTTT CACTTCTTTA TGATTCGCGA CCGCAATATT AACGCGTTCG CGTTTTTTGG TGGTTACGTA GCGTTGCACT CTGGGTTGTT TCTTCATGCG CGTTCAGAAA GTGAGTTGGC CTCTGTTGTT GCTCACGAGA TTGCGCACGT CACACAACGC CACCTTGCGC GCAGCATGGA AGAGCAAGCA CGTCGCTCTC CGGCCACATT AGCTGCACTC GCTGGCGCAT TACTGCTTTC GATTGCCTCA CCAGAAGCGG GGATGGCTGC AATTACGGCG GCAACCGCAG GTAACATGCA AAGCCAAATC AACTACACTC GCGCGAATGA AAAAGAAGCG GATCGCTTTG GTATTTCAAC ACTGGCAAAA GCTGGTTTTG ATGTTCAAGC AATGCCACGT TTTTTTGGCC GTCTTGCAGA TGAATATCGT TATGCGAGTA AACCGCCGCC AATGCTACTG ACTCACCCAC TACCTGAAGA TCGAATTACC GATAGCCGTG CGCGAGCAAG GACCTATCCA CCAATGCGAG TAGTGCCTTC AATAGACTAT CACCTAGCGC GTGCGCGCAT TGTAGCGCGG TACGCCGGCA TTGACGGACA AGCTGCTTTA GGCTGGTTTG AGCGAACTCA AAAGAAAGCC TCTGCGGACA TTACACCTGC TTTTGACTAT GGGCGAGCAC TCGTACATTT AGACAGCAAA CGCTTGTCTC AAGCGGAACC TATTTTGAAA AAGTTGCTGG AGCAGGACCC AAGTAACCCG TTCTACCTGG ATGCTATGAC GGATTTGTAT ATCGAGAAGA AGCAGCCAGA AAAAGCAACC GAGATGCTCC GTAAAGCGTT ATCTCGGAAC CCTCAAAATA AAGTATTGAC CATTAACTAT GCCAATGCGC TACTTGAGGA CAATAAAAAC GATCAAGCCA CGCGAGTTCT TCAAAGATAC ACTCATGATT ATCCTGAAGA TACAAATGGC TGGCACCTAA TATCGAAGAG CTACCACGCG CTAGGACGTA GTGATGAAGA GTTGGCTGCG CGAGCGGAAA TTTTGGCGTT GCGAGCAAAC TGGAATAAAG CGATTCAATA TTATAGTGAA GCAAGTAAAA TGGCCAAGTT GGGCAGCTTA GAGCAAGCTC GATACGATGC CCGTATTGAC CAACTCATGA TCCAAAGAGA TCGATTCATG GCATTACAAT AA
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Protein sequence | MLKRTRSLVC LCLAAAISSP TTYANSIDLP DIGTAAGGTL SIDQELIYGD AYMRMLRASK PIVNDPVINE YIDALGHRLV ANANDVKTPF HFFMIRDRNI NAFAFFGGYV ALHSGLFLHA RSESELASVV AHEIAHVTQR HLARSMEEQA RRSPATLAAL AGALLLSIAS PEAGMAAITA ATAGNMQSQI NYTRANEKEA DRFGISTLAK AGFDVQAMPR FFGRLADEYR YASKPPPMLL THPLPEDRIT DSRARARTYP PMRVVPSIDY HLARARIVAR YAGIDGQAAL GWFERTQKKA SADITPAFDY GRALVHLDSK RLSQAEPILK KLLEQDPSNP FYLDAMTDLY IEKKQPEKAT EMLRKALSRN PQNKVLTINY ANALLEDNKN DQATRVLQRY THDYPEDTNG WHLISKSYHA LGRSDEELAA RAEILALRAN WNKAIQYYSE ASKMAKLGSL EQARYDARID QLMIQRDRFM ALQ
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