Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002777 |
Symbol | |
ID | 8556505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1307252 |
End bp | 1309696 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646405868 |
Product | acyl-CoA dehydrogenase short-chain specific |
Protein accession | YP_003285404 |
Protein GI | 262393550 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.383126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATCT TGCTCTCAAT CATCACGATG ACGGTCGTGT TAGGCATTAC GCTCTACCAC CGCATGTCTC TCGTGAAATC TATTAGTTTA CTCACAGCAG CTATGTTAGC GCTTACAGTA ACAGGCGCGG TTGGCGTTAC TGGTTGGACG ATTTACGTTC TTGCTGCCGC TGTATTCGCG GTTCCTGGCG TACGTCAGTC TTTGATAAGT CGCAAAGCAT TAGCGCTTTT CAAGAAAGTG CTGCCAGCTA TGTCTCAAAC CGAAAAAGAA GCGTTAGACG CAGGTACCGT CTGGTGGGAA GCCGAACTAT TTAAAGGCAA ACCAGAATGG CAAAAGCTAC ACGCGATTCA AGCACCTAAG TTAAGTGCGG AAGAACAAGC CTTTTTAGAC GGCCCTGTGA ATGAAGTGTG CGCCATGGTG AGTGATTTCC AAGTGACCCA TGAACTCGCG GACTTACCGC CAGAAGTTTG GCAATACCTG AAAGATCACA AATTCTTCGC CATGATCATT AAGAAAAAGT ACGGTGGTCT TGAGTTCTCA GCATACGCTC AATCACTAGT ACTACAAAAA CTAACGGGTG TTTCTGGCGT TCTATCGTCT ACCGTTGGTG TTCCTAACTC TTTGGGCCCT GGTGAGCTAC TGCAACACTA CGGTACTGAA GATCAGAAAA ATCATTACTT ACCGCGCCTA GCTGAAGGTA AGGAAATCCC TTGTTTCGCC TTAACGAGTC CAGAAGCAGG CTCTGACGCT GGCTCTATTC CAGATTACGG TGTGGTTTGT AAAGGCGAAT GGGAAGGAAA AGAAGTACTG GGTATGCGCC TGACTTGGAA CAAGCGCTAC ATCACCCTAG CGCCAGTCGC AACGGTACTA GGCTTAGCAT TTAAACTTCG CGATCCTGAA GGTTTGCTAG GCGACAAAGA AGATCTTGGC ATCACTTGTG CGCTTATCCC AACTGATGTC AAAGGTGTTG AGATTGGTAA CCGACACTTC CCGCTCAATG TGCCATTCCA AAATGGTCCA ACGCGCGGTA AAGACATCTT TGTTCCTATC GATTTCATTA TCGGTGGTGA AAAAATGGCG GGCCAAGGTT GGCGTATGCT GGTTGAGTGT CTATCGGTTG GTCGTGGTAT CACGCTACCT TCAAACTCAA CAGGTGGCAT CAAAACTGCG GCAATGGCAA CGGGCGCTTA CTCACGCATT CGTCGCCAGT TCAAACAACC TATCGGTCAC ATGGAAGGCG TAGAAGAGCC ATTGGCACGT CTGGGTGGTA ACGCTTACGT AATGGACGCG GCAAGCAACT TAACCGTGGC AGGTATCGAC CTAGGTGAAA AACCTTCGGT TATCTCAGCT ATCGTGAAGT ACCACTGTAC TCATCGCGGT CAGCAAAGCA TCATCGACGC AATGGACATC GTGGGCGGTA AAGGGATCTG TATGGGACCT TCTAACTTCC TAGCCCGTGG TTACCAAGGT GCACCAATCG CGGTAACGGT TGAGGGTGCA AACATTTTAA CACGCTCAAT GATCATCTTT GGTCAAGGTG CGATTCGCTG TCATCCATAC GTTCTTGAAG AAATGAACGC CGCGTACTCT GATGCCAGTG ACTCTGTAGA GAAGTTTGAT AAAGCGCTTG CTGGTCACGT GAGCTTTACC ATGAGTAACC TCGTTCGCAG TATCTGGTTT GGTTTGAGCG ACGGTTTAGG TTCTTCATCA CCAACCAAAG ATGCAACCAA GCGTTACTAC CAACAGTTGA ACCGCTACAG TGCAAACCTT GCCTTGCTAT CGGATATCTC GATGGCAGTG CTAGGTGGCT CTTTGAAGCG TAAAGAGCGT CTATCAGCGC GTCTTGGTGA CATTCTAAGC CAGCTATATT TAAGCTCTGC GACGTTGAAA CGTTTTGAGC AAGATGGCCG CCCAGTCGAA GATTTACCAT TAGTACACTG GGGTCTACAA GACAGTTTGA AACAAGCGGA AGTGGCGGTA GACGAATTCT TAGCAAACTT CCCGAACAAA GTGATTGGTC GTGCACTGCG CGTGTTAATC ATGCCATTCG GTCGTGTACG CAAAGCGCCA AGCGATAAAC TAGACAGCAA AGTGGCGCGC ATTCTACAAA CGCCTAGTGC AACGCGCTCA CGCATTGGTC GCGGTCAGTA CCTTGAACCA ACCGAGCACA ACGCAGCAGG TAAGATTGAG CTTGCCCTGT CAGTCATTCT TCAAGCTGAG CCAGTGTTCG ACAAAGTATG TAAAGCTCAA GGCAAACGTC GTCCATTCCT ACGTTTGGAT ATGATTGCTC AGGAAGGGCT AGAGCAAGGC TTGATCACGC AAGAAGAAGC CGACCTACTA AGAGAAGCTG AACAGCATCG TCTGGATACA ATCAACGTTG ACGACTTTGA GCCGGAATTG CTCGCAGCAA AGCCGCTATA CCCTCAGATG GATAGCGTTG CCTAA
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Protein sequence | MDILLSIITM TVVLGITLYH RMSLVKSISL LTAAMLALTV TGAVGVTGWT IYVLAAAVFA VPGVRQSLIS RKALALFKKV LPAMSQTEKE ALDAGTVWWE AELFKGKPEW QKLHAIQAPK LSAEEQAFLD GPVNEVCAMV SDFQVTHELA DLPPEVWQYL KDHKFFAMII KKKYGGLEFS AYAQSLVLQK LTGVSGVLSS TVGVPNSLGP GELLQHYGTE DQKNHYLPRL AEGKEIPCFA LTSPEAGSDA GSIPDYGVVC KGEWEGKEVL GMRLTWNKRY ITLAPVATVL GLAFKLRDPE GLLGDKEDLG ITCALIPTDV KGVEIGNRHF PLNVPFQNGP TRGKDIFVPI DFIIGGEKMA GQGWRMLVEC LSVGRGITLP SNSTGGIKTA AMATGAYSRI RRQFKQPIGH MEGVEEPLAR LGGNAYVMDA ASNLTVAGID LGEKPSVISA IVKYHCTHRG QQSIIDAMDI VGGKGICMGP SNFLARGYQG APIAVTVEGA NILTRSMIIF GQGAIRCHPY VLEEMNAAYS DASDSVEKFD KALAGHVSFT MSNLVRSIWF GLSDGLGSSS PTKDATKRYY QQLNRYSANL ALLSDISMAV LGGSLKRKER LSARLGDILS QLYLSSATLK RFEQDGRPVE DLPLVHWGLQ DSLKQAEVAV DEFLANFPNK VIGRALRVLI MPFGRVRKAP SDKLDSKVAR ILQTPSATRS RIGRGQYLEP TEHNAAGKIE LALSVILQAE PVFDKVCKAQ GKRRPFLRLD MIAQEGLEQG LITQEEADLL REAEQHRLDT INVDDFEPEL LAAKPLYPQM DSVA
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