| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002762 |
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| Symbol | |
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| ID | 8556490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1288995 |
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| End bp | 1292474 |
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| Gene Length | 3480 bp |
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| Protein Length | 1159 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405853 |
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| Product | DNA polymerase III alpha subunit |
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| Protein accession | YP_003285389 |
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| Protein GI | 262393535 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATC CCAAATTCAT CCACCTGCGT GTTCATAGTG ACTTCTCGAT GGTGGATGGC
CTCAACAAAG TTCCGCCAAT CGTAAAGAAA GTTGCTGAAC TCGGTATGCC CGCAATGGCG
TTGACCGACT TTACCAACCT ATGTGGTTTG GTGAAGTTTT ACGGTACAGC ACATGGCAGT
GGTGTTAAAC CGATCATTGG TGCTGACTTT AAAATGCAGT CGGACGAGTT TGGTGAAGAG
TTGACTCAAG TGACTTTGCT TGCGGCGGAT AATGTGGGTT ATAAGAACCT GACGTTATTG
ATATCAAAAG CGTACTTACG TGGACATGTC CAACACCACC CTGTGATTGA TAAAGCCTGG
TTGGCTGAAA TGTCTGAAGG CTTGATTGTA TTATCCGGCG GTAAAAGCGG GGAAATTGGT
CGCGGCCTTT TGAAAGGCAA CCGTCAAATA GTGCAAGGGT GTGTTGATTT TTATAAACAG
CATTTTCCAG ATCGCTTTTA TCTTGAGTTA CTTCGTACCG GTCGTCCAGA TGAAGAGACT
TATCTTCACT TTGCAGTTGA ATTGGCAGAG CAGCAAGACT TGCCAGTAGT GGCGACCAAT
GAAGTTGTAT TCCTGAGTCC AGACCTATTT GATGCTCATG AAATACGCGT AGCGATTCAC
GATGGTTACA CATTAGAAGA TCCGCGTAGG CCAAAAAACT ACAGTCCGCA GCAATATCTT
CGTACAGAAG AAGAAATGTG CGAGCTGTTT GCTGATATTC CTGAAGCGTT AGAAAACAGT
GTCGAGATAG CGAAGCGTTG TAACGTGACT GTGCGCTTAG GGGAGTACTT CCTACCAGCC
TTCCCAACTG AAGGGATGAA AGAGACTGAG TTCTTAGTCA TGAAATCCCG AGAGGGCTTG
GAAGAGCGTT TAGAGTTCCT ATTTCCAGAT GAGGAAGAGA GGAAACGTCG TCGCCCTGAA
TATGATGAAC GTCTTCAGAT AGAGCTAGAT GTTATCAACC AAATGGGATT CCCTGGTTAC
TTCTTGATCG TAATGGAGTT CATCCAGTGG TCAAAAGATA ATGGAATTCC TGTAGGTCCT
GGACGTGGTT CCGGTGCCGG CTCTTTGGTG GCTTACGCAT TAAAAATCAC CGACCTGGAT
CCATTAGAAT ACGACTTGCT GTTCGAACGT TTCTTGAACC CAGAACGTGT CTCGATGCCC
GATTTCGACG TCGATTTCTG TATGGATAAA CGTGACCAGG TTATTGACCA CGTTGCGGAA
ATGTACGGTC GCGACGCGGT GTCTCAGATC ATCACGTTTG GTACCATGGC GGCAAAAGCG
GTAATCCGTG ACGTTGGCCG CGTATTGGGT CATCCATTTG GTTTTGTTGA TCGTATTTCA
AAGCTGATCC CGCCTGATCC AGGCATGACG CTAGATAAGG CGTTTAAAGC TGAACCTGCG
CTACCTGAAT TGTATGAGGC CGATGAGGAA GTTAAAGAAC TCATCGACAT GTGTCATATT
TTGGAAGGCT GTACGCGAAA CGCCGGTAAA CACGCTGGTG GCGTTGTAAT TTCACCTACA
ACAATTACCG ATTTTGCACC AATTTATGCA GACGCTGAAG GTCACTTTCC GGTTACTCAA
TTTGATAAAA ACGATGTTGA GACCGCTGGC CTAGTTAAGT TTGACTTCTT GGGTTTACGT
ACCTTAACCA TTATTGACTG GGCGTTAGGG CTGATTAACC CACGTCTAGA GCGAGAAGGT
AAAGAACCGG TTCAAATTGA ATCCATACCG TTAGAAGACC CAGCCTCTTT CCGTTTGTTG
CAAAACTCTG AAACGACAGC AGTATTCCAG CTTGAATCTC GAGGCATGAA AGAGCTGATC
AAACGACTTC AGCCCGACTG TTTCGAAGAC ATTATTGCTT TGGTAGCACT CTTCCGTCCG
GGTCCTTTGC AATCGGGCAT GGTAGATAAC TTTATCGACC GTAAACATGG CCGAGAGGCG
ATCTCTTATC CAGATGAAAA GTGGCAACAC GAGTCGCTAA AAGAGACGCT TGATCCAACC
TACGGCATCA TCTTGTACCA AGAGCAGGTT ATGCAGATTG CGCAGATCTT AGCGGGTTAC
ACGCTAGGTG GTGCGGACAT GCTCCGTCGT GCAATGGGTA AGAAAAAGCC AGAAGAGATG
GCAAAACAAC GTGCTATCTT TGAAGAAGGT GCGATAAAGA ACGGTATCGA TGGCGAGTTG
GCGATGAAAA TCTTCGACTT GGTAGAGAAG TTCGCTGGTT ATGGTTTTAA CAAATCGCAC
TCTGCTGCTT ATGCATTGGT TTCTTATCAG ACTCTTTGGC TGAAAACCCA TTATCCTGCC
GAGTTTATGG CCGCGGTAAT GACAGCTGAT ATGGATAACA CGGAAAAAGT CGTTGGCTTG
GTCGATGAGT GTTTCCGTAT GAAGCTCACC GTGCTGCCAC CAGACATCAA CTCTGGCCTA
TATCGCTTTA ATGTTGATGA AAATGGCGCA ATTGTTTACG GTATTGGTGC GATAAAAGGG
GTAGGTGAAG GCCCTATCGA TGCGATTCTT GAGGCGAGAA ATAAAGGTGG TCACTTTAAA
GACCTATTTG ATTTCTGTGC TCGAGTTGAT CTAAAACGCG TCAATAAACG AGTGATAGAG
AAGCTGATCT ACGCGGGCGC GTTAGATCGA CTAGGTCCAC ACCGCGCGGC GATGATGGCA
TCACTCAATG ATGCGGTAAA AGCGGCAAGT CAACATCACC AAGCCGAGGC GTTTGGCCAA
ACGGATATGT TTGGTGTGCT AACGGATGCG CCTGAAGAAG TAGAGCACAA GTATACGCAA
GTTCCGCCTT GGCCAGAAAA AGTGTGGTTA GAGGGCGAGC GTGATACCCT AGGCCTATAT
TTGACAGGGC ACCCAATTAA CGCCTACGTA AAGGAACTAA ACAAATACAC CAGTTGTCGA
CTAAAAGACG CAACGCCTAC GCGTCGCGAC CAATCTGTCA CGGTGGCTGG TTTGGTTATT
GCCGCTCGTG TAATGACGAC CAAGCGTGGT ACACGAATTG GCATTATGAC ACTGGATGAC
CGAAGTGGTC GTATGGAAGT GATGTTGTTC TCAGATGCAC TGGATCGATA CGCTGAACTT
CTCGAAAAAG ACAGAATTTT GGTCGTTTCC GGACAGGTCA GCTTTGATGA CTTCAACGGT
GGCCTTAAAA TGTCGGCGCG TGAAGTTATG GATCTCGGCA GTGCGCGCGA GAAATACGCT
CGTGGTTTGT CGGTATCGAT AGATGCAACT CAGATCAACG ATCAGTTTTT TGAGCAGTTC
AGCCGTATTT TAGAACCGCA CAAAGCCGGA ACCGTACCCG TCAATGTATA CTACCAGCGT
GCCGACGCCA GAGCGCGGTT AACATTGGGC ACCGAGTGGC GAGTAACGCC AAGTGATACA
TTACTCGACG ATTTAAAACA GTTACTTGGC AAAAGCCAGG TAGAACTCGA ATTTAACTAA
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| Protein sequence | MSDPKFIHLR VHSDFSMVDG LNKVPPIVKK VAELGMPAMA LTDFTNLCGL VKFYGTAHGS
GVKPIIGADF KMQSDEFGEE LTQVTLLAAD NVGYKNLTLL ISKAYLRGHV QHHPVIDKAW
LAEMSEGLIV LSGGKSGEIG RGLLKGNRQI VQGCVDFYKQ HFPDRFYLEL LRTGRPDEET
YLHFAVELAE QQDLPVVATN EVVFLSPDLF DAHEIRVAIH DGYTLEDPRR PKNYSPQQYL
RTEEEMCELF ADIPEALENS VEIAKRCNVT VRLGEYFLPA FPTEGMKETE FLVMKSREGL
EERLEFLFPD EEERKRRRPE YDERLQIELD VINQMGFPGY FLIVMEFIQW SKDNGIPVGP
GRGSGAGSLV AYALKITDLD PLEYDLLFER FLNPERVSMP DFDVDFCMDK RDQVIDHVAE
MYGRDAVSQI ITFGTMAAKA VIRDVGRVLG HPFGFVDRIS KLIPPDPGMT LDKAFKAEPA
LPELYEADEE VKELIDMCHI LEGCTRNAGK HAGGVVISPT TITDFAPIYA DAEGHFPVTQ
FDKNDVETAG LVKFDFLGLR TLTIIDWALG LINPRLEREG KEPVQIESIP LEDPASFRLL
QNSETTAVFQ LESRGMKELI KRLQPDCFED IIALVALFRP GPLQSGMVDN FIDRKHGREA
ISYPDEKWQH ESLKETLDPT YGIILYQEQV MQIAQILAGY TLGGADMLRR AMGKKKPEEM
AKQRAIFEEG AIKNGIDGEL AMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKTHYPA
EFMAAVMTAD MDNTEKVVGL VDECFRMKLT VLPPDINSGL YRFNVDENGA IVYGIGAIKG
VGEGPIDAIL EARNKGGHFK DLFDFCARVD LKRVNKRVIE KLIYAGALDR LGPHRAAMMA
SLNDAVKAAS QHHQAEAFGQ TDMFGVLTDA PEEVEHKYTQ VPPWPEKVWL EGERDTLGLY
LTGHPINAYV KELNKYTSCR LKDATPTRRD QSVTVAGLVI AARVMTTKRG TRIGIMTLDD
RSGRMEVMLF SDALDRYAEL LEKDRILVVS GQVSFDDFNG GLKMSAREVM DLGSAREKYA
RGLSVSIDAT QINDQFFEQF SRILEPHKAG TVPVNVYYQR ADARARLTLG TEWRVTPSDT
LLDDLKQLLG KSQVELEFN
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