| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002748 |
|---|
| Symbol | |
|---|
| ID | 8556476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 1275811 |
|---|
| End bp | 1276536 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646405839 |
|---|
| Product | uridylate kinase |
|---|
| Protein accession | YP_003285375 |
|---|
| Protein GI | 262393521 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0528] Uridylate kinase |
|---|
| TIGRFAM ID | [TIGR02075] uridylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000503391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACGA ACCCTAAACC AGCGTATCAA CGTATTCTAT TAAAACTGAG TGGTGAAGCT
CTTCAAGGTG AAGACGGTTT TGGTATTGAT CCTGCGGTCC TTGATCGCAT GGCACAAGAA
GTTAAAGAAC TGGTTGAACT GGGTGTTCAG GTTGGTGTAG TTATCGGTGG CGGTAACTTG
TTCCGTGGTG CAGGCCTTGC TGAAGCTGGT ATGAACCGCG TAGTTGGTGA CCACATGGGT
ATGCTTGCTA CAGTAATGAA TGGCCTAGCG ATGCGCGATG CTCTTCACCG CGCATACGTG
AATGCGCGCG TTATGTCTGC CATTCCTCTA AAAGGCGTAT GTGACGACTA TAATTGGGCT
GATGCGATCC GTGAGCTTCG CCAAGGCCGT GTTGTCATCT TCTCTGCTGG TACGGGTAAC
CCGTTCTTTA CAACGGATTC TGCTGCTTGC CTACGTGGTA TTGAAATCGA AGCGGATGTT
GTACTAAAAG CGACGAAAGT TGATGGTGTA TTTACTGCTG ACCCTGTAGC AAACCCAGAC
GCAGAGCTGT ATGATAAGCT ATCTTACGCA GAAGTTCTGG ATAAAGAGCT GAAAGTGATG
GACTTGGCGG CGTTTACGCT AGCTCGTGAC CACAAAATGC CAATCCGCGT ATTTAACATG
AACAAGCCAG GCGCACTACG TCGCGTGGTT ATGGGCGAAG CAGAAGGCAC GCTAATCAAC
GAATAA
|
|---|
| Protein sequence | MTTNPKPAYQ RILLKLSGEA LQGEDGFGID PAVLDRMAQE VKELVELGVQ VGVVIGGGNL
FRGAGLAEAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARVMSAIPL KGVCDDYNWA
DAIRELRQGR VVIFSAGTGN PFFTTDSAAC LRGIEIEADV VLKATKVDGV FTADPVANPD
AELYDKLSYA EVLDKELKVM DLAAFTLARD HKMPIRVFNM NKPGALRRVV MGEAEGTLIN
E
|
|---|
| |