| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002697 |
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| Symbol | |
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| ID | 8556425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1226107 |
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| End bp | 1226925 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646405788 |
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| Product | outer membrane protein OmpK |
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| Protein accession | YP_003285324 |
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| Protein GI | 262393470 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.302081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAT CACTTTTAGC TCTTAGCCTT CTAGCGGCTA CTTCAGCTCC AGTTATGGCG
GCAGATTACT CTGACGGCGA TATCCACAAA AACGATTACA AGTGGATGCA ATTTAACCTA
ATGGGTGCAT TCAACGAGAA AGGTTATGCT GAATCTTCTC ATGATTACCT AGAGATGGAA
TTTGGCGGTC GCTCTGGTAT TTTCGATCTA TACGGCTACG TTGACGTATT CAACCTAGCT
TCTGATCCAG GCAGCGACAA AGCTGGTGGC GAGAAAATCT TCATGAAATT TGCTCCACGT
ATGTCTCTAG ATGCAGTAAC TGGTAAAGAC CTATCTTTCG GTCCAGTTCA AGAGCTATAC
GTTGCAACTC TAATCGAGTG GGGTGGTAAC TCTGATGTTA ACTCTCAAAA AATCGGTCTA
GGTTCTGACG TAATGGTACC TTGGTTCGGC AAAGTTGGCC TAAACCTTTA CGGTACATAC
GATGGCAACA AAAAAGACTG GAACGGTTTC CAAGTTTCTA CTAACTGGTT CAAACCATTC
TACTTCTTCG AGAACGGCTC ATTCATTTCT TACCAAGGTT ACATTGATTA CCAATTCGGT
ATGGATGACG ACAAAGGCAA TAAGTTCAAC ACTACAGCAT CTAACGGCGG TGCTATGTTC
AACGGCATCT ACTGGCACTC TGACCGCTTT GCTGTTGGCT ACGGTCTGAA GCTATACAAA
GACGTATACG GCTTTAAAGA TGGCGAAGCT CTACCATGGG GTCATAAGCC AGAGTCTTCT
GGTGTAGGTC ACTATGTAGC TGTAACTTAC AAGTTCTAA
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| Protein sequence | MRKSLLALSL LAATSAPVMA ADYSDGDIHK NDYKWMQFNL MGAFNEKGYA ESSHDYLEME
FGGRSGIFDL YGYVDVFNLA SDPGSDKAGG EKIFMKFAPR MSLDAVTGKD LSFGPVQELY
VATLIEWGGN SDVNSQKIGL GSDVMVPWFG KVGLNLYGTY DGNKKDWNGF QVSTNWFKPF
YFFENGSFIS YQGYIDYQFG MDDDKGNKFN TTASNGGAMF NGIYWHSDRF AVGYGLKLYK
DVYGFKDGEA LPWGHKPESS GVGHYVAVTY KF
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