Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002676 |
Symbol | |
ID | 8556404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1196839 |
End bp | 1197693 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646405767 |
Product | glycerol uptake facilitator protein |
Protein accession | YP_003285303 |
Protein GI | 262393449 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACGA ACAAACACCC CTCTCTGCTC GGAGAATGTT TGGCCGAGTT TATCGGTACA GGACTACTTA TCTTCTTCGG CGTAGGCTGT GTCGCAGCCT TAGTTCTAAC AGGCGCATCA TTTGGACAAT GGGAAATCAG TATTGTATGG GGCCTAGGTG TCGCCATCGC TATTTACTGT ACTGCCGGCG TTTCAGGCGC GCACATCAAC CCAGCGGTAA CCATCGCACT CGCTATGTTC CATGGTTTTG ATAAGGCGAA AGTGATGCCA TACATCATCG CCCAAATGCT TGGCGCATTC TGCTCTGCTG CGTTGGTTTA CAGCTTATAC AGCAACCTTT TCACCGACTA CGAAATCGCA CATAACTTCG TCCGCAGTAG CCAAGATGCA CTAGCAACCG CTGGTATCTT CTCAACCTAT CCACATGCTT CCCTCTCTTT CTTTGGCGCT TTTGCTGTGG AATTCGTTAT CACTGCCGTG CTGATGTTTG CGATTTTGGC TTTGGGCGAT GAAAATAACG GCGCTGCACG AGGTGCAATG AACCCGCTGT TAATCGGTAT TTTGATTGCC GTGATCGGTG GTTCTCTTGG TCCACTAACT GGCTTCGCGA TGAACCCTGC GCGCGACTTT GGACCGAAAC TGTTCGCTTA CTTCGCAGGC TGGGATTACG CTCTGACAGG TGCTAAAGAC ATTCCTTACT TTATCGTGCC TTTACTTGCT CCGATTGCAG GTGCGTGCTT TGGTGGTTGG TTGTATCCAA AAGCGATTGC GGCTTACCTT CCACAACAAG GCCACGGCTG TACAATTCCA AACCAATGTG AGACGGAAGA AGAAACAGAA GAAGCTAGAG CTTAA
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Protein sequence | MTTNKHPSLL GECLAEFIGT GLLIFFGVGC VAALVLTGAS FGQWEISIVW GLGVAIAIYC TAGVSGAHIN PAVTIALAMF HGFDKAKVMP YIIAQMLGAF CSAALVYSLY SNLFTDYEIA HNFVRSSQDA LATAGIFSTY PHASLSFFGA FAVEFVITAV LMFAILALGD ENNGAARGAM NPLLIGILIA VIGGSLGPLT GFAMNPARDF GPKLFAYFAG WDYALTGAKD IPYFIVPLLA PIAGACFGGW LYPKAIAAYL PQQGHGCTIP NQCETEEETE EARA
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