| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002656 |
|---|
| Symbol | |
|---|
| ID | 8556384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1171848 |
|---|
| End bp | 1173281 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646405747 |
|---|
| Product | putative oxidoreductase |
|---|
| Protein accession | YP_003285283 |
|---|
| Protein GI | 262393429 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAT CCAAACGTAA TACGATAGGC AAATTCGGGT TGTTGTCCCT CACCTTTGCT
GCAGTATTTA GCTTTAATAA CGTAATCAAT AACAACATCG AGATCGGTCT AGCGTCTGCG
CCAATGTTCT TTCTGGCGAC CATTTTTTAT TTCATCCCTT TCTGTTTGAT CATCGCAGAA
TTCGTATCTC TGAATAAAGA TTCTGAAGCG GGTGTCTACG CATGGGTAAA AAGCTCACTC
GGCGGTCGCT GGGCGTTTAT CTCTGCCTAC ACTTATTGGT TCGTTAACCT ATTCTTCTTC
ACGTCCTTGC TGCCGCGTGT TATCGCTTAT GCGTCTTACG CGTTCTTGGG CTATGAATAC
ATTCTGACGC CATTCACCAC TACCGTACTC AGTATGATTT TGTTTGCGTT TGCGACCTAC
GTATCGACGA ACGGCGCGAA AATGTTGGGG CCAATTACGT CGGTGACCTC CTCCCTCATG
CTGCTACTGA CAATGTCGTA CATTTTACTG GCTGGCGCAG CGTTGATCGG CGGCGTAGAA
CCAGCTGACC CAATTACTGT AGAAGCGATG ATCCCTGATT TCAGCTGGGC ATTTTTAGGC
ATTACTACAT GGATCTTTAT GGCGGCAGGC GGTGCGGAAT CGGTCGCGGT TTACGTAAAC
GATGTGAAAG GCGGCTCGAA ATCGTTCGTT AAAGTCATCA TCATCGCAGG TATCTTTATC
GGCGTGCTTT ACTCAGTTGC GTCTGTTTTG ATTAACGTAT TTGTTCCTAG CGAAACCCTA
AAATACACGG GAGGCTCGGT TCAAGTATTT GAAGGTTTGG CTGCGTACTT TGGTTTGCCA
GAAGTATTGA TGAACCGCTT CGTAGGCTTG GTATCCTTTA CCGCTATGTT TGGCTCTCTA
CTGATGTGGA CAGCAACGCC AGTGAAAATC TTCTTCTCTG AGATTCCAGA AGGCATTTTT
GGTAAGAAAA CCGTAGAGCT GAACGAAAAC GGCGTGCCAG CTCGCGCAGC TTGGTATCAG
TTCCTTATCG TTATCCCATT GATGATCATC CCAACATTAG GTTCTAACAC CGCTCAAGAT
CTGATGAACA CCGTGATCAA CATGACCGCG GCGGCATCCA TGCTGCCACC GCTGTTCATC
ATGCTGGCTT ACCTGAATCT GCGCTTGAAA CTGGATCACG TCGAGCGTGA TTTCAAAATG
GGCTCACGCA AAATGGGCAT CGCTACCGTA TCGGTACTGA TCGCTATCTT TACTGTTGGT
TTCTTAGCAT CGACCTTCCC TACGGGGGCC GACATCATGA CCATCATTTT CTACAACGTT
GGCGGTATCG TGATTTTCCT TGGCTTTGCT TGGTGGAAGT ACAGCCAATA CGAAAAATCA
TTGAATCAGG AAGAGCGTAT AAAAGAAGCC GCGCCAGCTT CGCAAGCGGT ATAA
|
|---|
| Protein sequence | MSESKRNTIG KFGLLSLTFA AVFSFNNVIN NNIEIGLASA PMFFLATIFY FIPFCLIIAE
FVSLNKDSEA GVYAWVKSSL GGRWAFISAY TYWFVNLFFF TSLLPRVIAY ASYAFLGYEY
ILTPFTTTVL SMILFAFATY VSTNGAKMLG PITSVTSSLM LLLTMSYILL AGAALIGGVE
PADPITVEAM IPDFSWAFLG ITTWIFMAAG GAESVAVYVN DVKGGSKSFV KVIIIAGIFI
GVLYSVASVL INVFVPSETL KYTGGSVQVF EGLAAYFGLP EVLMNRFVGL VSFTAMFGSL
LMWTATPVKI FFSEIPEGIF GKKTVELNEN GVPARAAWYQ FLIVIPLMII PTLGSNTAQD
LMNTVINMTA AASMLPPLFI MLAYLNLRLK LDHVERDFKM GSRKMGIATV SVLIAIFTVG
FLASTFPTGA DIMTIIFYNV GGIVIFLGFA WWKYSQYEKS LNQEERIKEA APASQAV
|
|---|
| |