| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002649 |
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| Symbol | |
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| ID | 8556377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1163943 |
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| End bp | 1165319 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405740 |
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| Product | type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF TadA subfamily |
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| Protein accession | YP_003285276 |
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| Protein GI | 262393422 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATGTCG AGTTGGCAAA ATCTGACGAA GATACGTCAG ATGAGCAAAG GGCTTTATCG
CCTGTTGAAG CCAAGATGAA AGCGATCGAG GAGCAGAAAA AACAGCTAGA ACAAGATCTC
TCGATCAAAC ACTACTATCA CAAAAAGCTA CTGGATACCT TGGATCTCGG GCTTCTATCG
CACTTGCAAG AAGATCGCGC GAAAGAGGAG TTACGCGAAG CGGTCGTTCA GCTCATTGCT
GAAGATCAAA CACACCCGTT GAGCTCTGAA GCTCGCAATC GCGTGATACA TCAAATTGAA
GATGAAGTGT TTGGTCTAGG GCCGCTGGAA CCGCTGCTTG AAGACCCAAC GATTTCAGAT
ATCTTGGTCA ATGGTCCGAA AAATATCTTT GTCGAACGTT TTGGTAAGCT CGAGAAAACG
CCACATACCT TCTTAGATGA GCGCCATCTG CGCAACATCA TTGATCGCAT TGTTAGCCAG
GTTGGACGAA GAATCGATGA AGCATCACCA ATGGTGGATG CTCGACTCAA AGACGGTTCG
CGTTTCAATG CGATTATTCC TCCTCTTGCC ATTGATGGCC CTTCCGTTTC TATTCGACGT
TTTGCGGTTG AACGTTTGAA TATGGATAAC CTATTAGAGC TTGGTTCGTT ATCTCCAGAG
ATGGCGAAGT TTCTCAATGC TGCGGTCGTG GGGGAAATGA ATATCCTGAT ATCTGGTGGT
ACAGGCTCTG GTAAAACAAC CACGCTGAAT ATTTTGTCGG GCTTCATTCC AAGTGATCAA
CGTATTGTGA CCATTGAGGA TTCGGCAGAG TTACAACTCC AACAACCACA TATTATTCGC
TTAGAAACAC GTCCTTCTAA CATCGAGGGT AAAGGCGAAA TATCTCAGCG CGATTTAGTG
AAAAACTCGC TACGTATGCG TCCTGACCGG ATAGTTGTTG GTGAGGTTCG TGGCTCAGAA
GCGGTGGATA TGTTATCGGC AATGAACACG GGTCATGATG GGTCGCTGGC CACCATTCAC
GCGAACACAC CAAGGGATGC GTTGAGCCGT ATTGAGAATA TGTTCTCGAT GGCGGGTTGG
AATGTGTCGA CCAAAAACTT GAGAGCGCAG ATTGCCTCCG CCATCAATAT TGTCGTGCAA
ATGGATCGCC AAGAAGACGG TAAACGCCGC ATGGTCAGCG TACAAGAAAT CAATGGCATG
GAAGGCGACG TTATCACCAT GTCGGAGATC TTCACCTTCC AAAGAAGAGG GGTCGATCAA
GAAGGTAATG TGTTAGGTGA TTACATGGCA ACAGGGATTG TACCAAGCTG TCATGACCAA
TTAGTAAAAC GAGGCTTAGA CGTACCATTT GAAATATTCA ATGAAAAAGC CCGTTAG
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| Protein sequence | MNVELAKSDE DTSDEQRALS PVEAKMKAIE EQKKQLEQDL SIKHYYHKKL LDTLDLGLLS
HLQEDRAKEE LREAVVQLIA EDQTHPLSSE ARNRVIHQIE DEVFGLGPLE PLLEDPTISD
ILVNGPKNIF VERFGKLEKT PHTFLDERHL RNIIDRIVSQ VGRRIDEASP MVDARLKDGS
RFNAIIPPLA IDGPSVSIRR FAVERLNMDN LLELGSLSPE MAKFLNAAVV GEMNILISGG
TGSGKTTTLN ILSGFIPSDQ RIVTIEDSAE LQLQQPHIIR LETRPSNIEG KGEISQRDLV
KNSLRMRPDR IVVGEVRGSE AVDMLSAMNT GHDGSLATIH ANTPRDALSR IENMFSMAGW
NVSTKNLRAQ IASAINIVVQ MDRQEDGKRR MVSVQEINGM EGDVITMSEI FTFQRRGVDQ
EGNVLGDYMA TGIVPSCHDQ LVKRGLDVPF EIFNEKAR
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