| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002640 |
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| Symbol | |
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| ID | 8556368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1154795 |
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| End bp | 1155520 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646405731 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_003285267 |
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| Protein GI | 262393413 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.632133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAGAC TGACCAAAGC TTATTGGATT GGAGAGACTC TTTGCTCGCT GCCGGAATCA
CTTCGCTGTG AGTTTGATAA GAGCTTTGAG ATTATGGACT GTAGCAAAGA TATCTCTGTG
CTTAGCGATA AAGAACACAG CTATTTCTTC TACTACATGA CTTGCGATCA TCGAGAGCAC
CTGAAAGGCG TCATCACGCT CTGTGAAAAT CTCGACAAAA AACTGATCGT TATACATCCA
ACCGATATCG AGCCTCACTT ACCGCCAAAG CATATTTGTG CGGAATATTA TACGTTGAAT
GAAATCACCC TCCCGATTTG GCTATCACAG ATAAAATTGA AATACTTTTT GCACAGCAAG
GTCGACGAAG AACAAATTTC GGTCGATAAA CTCTTTTCTC GAAGCGGAAA GTCGAATTTT
TCTGACGTGG TTCATTACAT CGCCAATAAC GTCCATAAAG ACCTAAGGGA AGAGGAAGCT
GCTGCGCTTT GTCACTACTC ACCGAACTAC TTTTCCAAAG TATTTCATCG CAAAGTTGGT
ATGTGCTTTC GTGATTATGT CACTGCGAAA CGCATTTCAT TAGCAAAGAA AATGCTCGTT
GAAAATGAAT CCATGAAAAT TGCCTATATT GCTTATCAAT GTGGATACCG AGATGTCTCT
TACTTTTCTC GAATTTTTAA GAAAAAAACA GGCCTGTCCC CAGCGAATTA CCGGCAACAG
TTTTAG
|
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| Protein sequence | MDRLTKAYWI GETLCSLPES LRCEFDKSFE IMDCSKDISV LSDKEHSYFF YYMTCDHREH
LKGVITLCEN LDKKLIVIHP TDIEPHLPPK HICAEYYTLN EITLPIWLSQ IKLKYFLHSK
VDEEQISVDK LFSRSGKSNF SDVVHYIANN VHKDLREEEA AALCHYSPNY FSKVFHRKVG
MCFRDYVTAK RISLAKKMLV ENESMKIAYI AYQCGYRDVS YFSRIFKKKT GLSPANYRQQ
F
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