| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002628 |
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| Symbol | |
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| ID | 8556356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1137285 |
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| End bp | 1138568 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405719 |
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| Product | nucleoside permease NupC |
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| Protein accession | YP_003285255 |
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| Protein GI | 262393401 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000361858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGT TTATGAGCCT AATCGGTATG GTAGTGCTTC TTGCGATTGC AGTGGCATTT
TCTAATAACC GAAAAGCTAT CAATCTAAGA ACTGTGGGTG GCGCATTCGC TATCCAATTC
GCATTAGGTG CATTTGTTCT GTATGTACCT TGGGGCCGTG ATCTACTAAA CGGTTTCTCT
TCAGGTGTTT CTAACGTTAT CAACTACGGT AACGATGGTT CATCATTCCT GTTCGGTGGT
CTTGTTTCTG ACAAGATGTT CGAAGTATTC GGCGGCGGCG GTTTCATCTT CGCATTCCGT
GTTCTTCCTA CACTGATCTT CTTCTCTGCA CTGATTTCAG TTCTTTACTA CATTGGCGTT
ATGCAATGGG TTATCAAGAT TCTTGGTGGC GCACTACAAA AAGCGCTGGG CACTTCACGT
GCGGAATCAA TGTCAGCAGC AGCAAACATT TTCGTAGGTC AAACAGAAGC ACCTCTAGTT
GTTCGTCCAT TCGTTCCAAA AATGACTCAA TCAGAGCTAT TCGCGGTAAT GTGTGGTGGT
CTAGCTTCTG TTGCTGGTGG TGTACTAGCG GGCTACGCTT CAATGGGTGT TCCACTAGAG
TACCTAGTAG CAGCATCATT CATGGCGGCA CCAGGTGGTC TACTATTCGC TAAAATCCTT
CACCCAGAGA CTGACCAGCC TCACGAAAGT ATCGAAGAAG CGATGGACGG CGGCGACGAC
AAACCAGTAA ACGTAATCGA CGCAGCAGCG GGCGGTGCGG CTTCTGGTCT ACAACTTGCG
CTTAACGTAG GTGCAATGCT AATCGCATTC GTTGGTCTAA TCGCGCTGAT CAACGGTATG
CTAGGTGGCA TCGGTGGTTG GTTCGGCATG CCAGAACTAA CGCTAGAGCT AATCCTAGGT
TACGCATTCT CTCCACTAGC ATTCCTAATC GGTGTTCCAT GGGCTGAAGC AGTAACTGCT
GGTTCATTCA TCGGTCAGAA AATCGTAGTG AACGAATTCG TTGCTTACTT GAACTTCACA
CCATACCTAG GTGAAAACGC TCAAGTAATC GCGGCAACTG GTGAAGTAAT GTCTGAGAAG
ACAACAGCTA TCATCTCATT CGCACTATGT GGTTTCGCGA ACCTTTCTTC TATCGCGATT
CTACTTGGTG GTCTAGGTAG CCTTGCACCA AACCGTCGTA GTGACATCGC TCGCATGGGT
GTTAAAGCTG TTCTTGCAGG TACGTTGTCT AACCTTATGG CAGCGACAAT TGCAGGCTTC
TGCTTAAGCC TTGCAGCACT ATAA
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| Protein sequence | MSLFMSLIGM VVLLAIAVAF SNNRKAINLR TVGGAFAIQF ALGAFVLYVP WGRDLLNGFS
SGVSNVINYG NDGSSFLFGG LVSDKMFEVF GGGGFIFAFR VLPTLIFFSA LISVLYYIGV
MQWVIKILGG ALQKALGTSR AESMSAAANI FVGQTEAPLV VRPFVPKMTQ SELFAVMCGG
LASVAGGVLA GYASMGVPLE YLVAASFMAA PGGLLFAKIL HPETDQPHES IEEAMDGGDD
KPVNVIDAAA GGAASGLQLA LNVGAMLIAF VGLIALINGM LGGIGGWFGM PELTLELILG
YAFSPLAFLI GVPWAEAVTA GSFIGQKIVV NEFVAYLNFT PYLGENAQVI AATGEVMSEK
TTAIISFALC GFANLSSIAI LLGGLGSLAP NRRSDIARMG VKAVLAGTLS NLMAATIAGF
CLSLAAL
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