| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002611 |
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| Symbol | |
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| ID | 8556339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1120308 |
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| End bp | 1121261 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405702 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003285238 |
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| Protein GI | 262393384 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGTC GTCGTAAAGG TCGTCCAATT AATGGCGTTA TACTGTTGGA CAAACCAACA
GGCATCTCTT CCAATGATGC ACTGCAAAAA GTAAAGCGAA TCTACTTTGC TGAGAAAGCA
GGCCACACTG GTGCCTTGGA CCCATTAGCG ACAGGCATGC TGCCAATTTG CTTGGGTGAA
GCGACGAAGT TTTCTCAGTT TCTTCTAGAT TCTGATAAAC GCTACCGTGT GATCGCAAAG
CTTGGTGAAC GTACCAACAC GTCTGACTCG GATGGTGAAG TCGTAGAGAC ACGTCCAATC
GATGTTACGT TAGACAAGCT AGAAGCGTGC ATTGAGAAGT TCCGTGGCGA ATCTGATCAA
GTACCTTCCA TGTTTTCAGC GTTGAAATAT CAAGGGAAAC CCTTGTATGA ATACGCTCGA
AAAGGCATCG AAGTTCCGCG TGAATCTCGT AAGATCACGG TATATGAGAT TGTTCTTCAC
CGTTTTGAAG GCGATGAAGT CGAGATGGAA GTTCATTGCT CAAAAGGCAC CTACATTCGT
ACCATCGTGG ATGACCTAGG CGAAATGTTA GGTTGTGGTG CGCACGTAAC TATGCTTCGA
CGCACTGGTG TTGCGAAATA CCCTTACGAG AAGATGGTGA CACTTGAGCA ACTGAATGAG
TTACTAGAGC AAGCACACCG TGAAGAACGC GCTCCTCGAG AACTACTGGA CCCATTGCTG
TTACCAATGG ATACAGCGGT AGAAGACTTA CCAGAAGTCA ACTTAGTGCC TGAACTGGCG
GATATGGTTC AGCATGGGCA ACCTGTTCAA GTATTTGGTG CGCCTACCGA AGGCTCACTT
CGCCTTACCA TGGGTGAAGA GCGTTTGTTT ATTGGCGTTG GCGAAATGAA CGAAGATGGC
AAAATCGCTC CTAAGCGATT GGTTGTGTTC CGAGATGACG TCGCATCCAA GTAA
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| Protein sequence | MARRRKGRPI NGVILLDKPT GISSNDALQK VKRIYFAEKA GHTGALDPLA TGMLPICLGE
ATKFSQFLLD SDKRYRVIAK LGERTNTSDS DGEVVETRPI DVTLDKLEAC IEKFRGESDQ
VPSMFSALKY QGKPLYEYAR KGIEVPRESR KITVYEIVLH RFEGDEVEME VHCSKGTYIR
TIVDDLGEML GCGAHVTMLR RTGVAKYPYE KMVTLEQLNE LLEQAHREER APRELLDPLL
LPMDTAVEDL PEVNLVPELA DMVQHGQPVQ VFGAPTEGSL RLTMGEERLF IGVGEMNEDG
KIAPKRLVVF RDDVASK
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