Gene VEA_002603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002603 
Symbol 
ID8556329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1109844 
End bp1111826 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content47% 
IMG OID646405692 
Productcell division protein FtsH 
Protein accessionYP_003285230 
Protein GI262393376 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000182706 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGACA TGGCAAAAAA TTTAATTCTG TGGCTTGTTA TCGCCGTCGT ATTGATGTCG 
GTATTCCAGA GCTTTGGCCC TGGAGAAAGC AATGGCAGAA CCGTGGATTA CACCACGTTT
GTACAGGAAG TTGGCCAAGG CCAGATTCAA GAAGCAACTT TTAAAGACGG TGAAATTAGC
TTTGTTCGTC GTGGCGGCGG TGCCAAAATG GTCACTTACA TGCCAGTGTA TGACCAAAAG
CTTCTAGATG ACCTAATTAA CCAAAACGTG AAAGTACAGG GCACGCCTCC AGAAGAGCAA
AGCTTGCTTG GTACTATTTT CATTTCTTGG TTCCCAATGA TCTTACTGAT TGGTGTATGG
ATTTTCTTCA TGCGTCAAAT GCAAGGCGGC GGCGGTAAAG GCGCTATGTC TTTTGGTAAG
AGCAAAGCTC GAATGATGAG CGAAGAACAA ATCAAGACAA CTTTTGCTGA CGTCGCTGGT
TGTGACGAAG CAAAAGAAGA CGTGAAAGAG CTGGTGGACT ACTTGCGTGA TCCAAGCCGC
TTCCAAAAAC TGGGCGGTAA GATTCCTACT GGTGTGTTAA TGGTTGGTCC TCCTGGTACT
GGTAAAACGC TTCTAGCGAA AGCCATTGCT GGTGAAGCAA AAGTACCATT TTTTACCATC
TCGGGTTCAG ATTTCGTAGA AATGTTTGTG GGTGTCGGTG CATCTCGTGT ACGTGACATG
TTCGAACAAG CTAAGAAAGC AGCGCCTTGT ATTATCTTCA TCGATGAAAT CGATGCGGTA
GGTCGTCAGC GTGGTGCTGG TGTTGGTGGT GGTCACGATG AACGTGAGCA AACACTAAAC
CAAATGCTAG TAGAGATGGA TGGTTTCGAA GGTAACGAAG GTATCATCGT AATCGCTGCA
ACTAACCGTC CAGACGTTCT TGATCCAGCG TTGCTACGTC CTGGTCGTTT TGACCGCCAA
GTAGTGGTTG GATTGCCAGA TGTACGTGGT CGTGAGCAGA TTCTAAAAGT ACACATGCGT
AAAGTCCCTC TAGCAGGTGA CGTAGAGCCT TCTCTAATCG CTCGTGGTAC ACCAGGCTTC
TCTGGTGCTG ATTTAGCAAA CCTAGTCAAC GAAGCGGCGC TATTTGCTGC GCGTGGTAAC
AAGCGTAACG TTTCTATGGT TGAATTCGAA TTAGCGAAAG ATAAAATCAT GATGGGTGCC
GAGCGCCGTT CAATGGTGAT GTCTGAAGAG ACAAAAGAGT CAACGGCTTA TCACGAAGCA
GGTCACGCAA TTGTTGGTCG TTTAGTACCT GAGCACGATC CAGTGTACAA AGTGTCGATC
ATTCCACGCG GTCGCGCGTT GGGTGTGACG ATGTACCTAC CAGAGCAAGA CCGTGTCAGC
ATGTCTCGCC AGCATCTAGA GTCTATGATC TCTAGCTTGT ACGGTGGTCG TCTAGCGGAA
GAGCTTATCT ACGGTGCTGA TAAAGTCTCA ACAGGCGCGT CAAACGATAT TGAACGTGCA
ACTGATATTG CTCGTAAGAT GGTTACTCAA TGGGGTTTCT CTGAAAAGCT TGGTCCTCTA
CTGTATGCAG AAGATGAAGG TGAGGTGTTC CTTGGTCGTA GCGTGACTCA GACCAAGCAT
GTATCTGATG ATACGGCGAA GCTGATTGAT GATGAAGTTC GTCAAATCAT TGACCGCAAC
TATGACCGTG CGAAGAAGAT TCTTCAAGAA AACATGGATA TCATGCATGC GATGAAAGAT
GCGCTGATGA AGTATGAAAC CATTGATGCT CGTCAAATTG ATGATTTAAT GGAGCGCAAA
GCTGAAATTC GTGAGCCTGC GGGTTGGAGT GATAACTCAA CTAGCAAACC TGAAGACAGC
GAGAAGCCTC AAGCAAAGCC AGAAGTTAAA GAAGAAGCTA CGGACGCTGC GAAAGATGCA
GAAAAGTCTA GCTCTCCAGA AGCGACTTCT AGCGAAGCGC CTGAAAAGAA AGACTCTGAA
TAA
 
Protein sequence
MSDMAKNLIL WLVIAVVLMS VFQSFGPGES NGRTVDYTTF VQEVGQGQIQ EATFKDGEIS 
FVRRGGGAKM VTYMPVYDQK LLDDLINQNV KVQGTPPEEQ SLLGTIFISW FPMILLIGVW
IFFMRQMQGG GGKGAMSFGK SKARMMSEEQ IKTTFADVAG CDEAKEDVKE LVDYLRDPSR
FQKLGGKIPT GVLMVGPPGT GKTLLAKAIA GEAKVPFFTI SGSDFVEMFV GVGASRVRDM
FEQAKKAAPC IIFIDEIDAV GRQRGAGVGG GHDEREQTLN QMLVEMDGFE GNEGIIVIAA
TNRPDVLDPA LLRPGRFDRQ VVVGLPDVRG REQILKVHMR KVPLAGDVEP SLIARGTPGF
SGADLANLVN EAALFAARGN KRNVSMVEFE LAKDKIMMGA ERRSMVMSEE TKESTAYHEA
GHAIVGRLVP EHDPVYKVSI IPRGRALGVT MYLPEQDRVS MSRQHLESMI SSLYGGRLAE
ELIYGADKVS TGASNDIERA TDIARKMVTQ WGFSEKLGPL LYAEDEGEVF LGRSVTQTKH
VSDDTAKLID DEVRQIIDRN YDRAKKILQE NMDIMHAMKD ALMKYETIDA RQIDDLMERK
AEIREPAGWS DNSTSKPEDS EKPQAKPEVK EEATDAAKDA EKSSSPEATS SEAPEKKDSE