| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002599 |
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| Symbol | |
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| ID | 8556325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1106568 |
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| End bp | 1107578 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405688 |
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| Product | outer membrane protein OmpU |
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| Protein accession | YP_003285226 |
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| Protein GI | 262393372 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0233564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CTCTAATTGC TCTTTCTGTA TCTGCAGCAG CTATGGCAAC TGGCGTAAAC
GCAGCTGAAC TTTACAACCA AGACGGCACT TCTCTAGAAA TGGGCGGCCG TGCTGAAGCA
CGTCTATCTA TGAAAGATGG CGACGCTCAA GACAAATCTC GCATCCGTCT AAACTTCCTT
GGTAAACAAG AGATCAATGA CAACCTATAC GGTGTTGGTT TCTGGGAAGG TGAATTTGAG
ACTGCTCAAA ACGGTACTGT AGACGGCGAC GACAAGAGCG ATCTAGAAAC TCGTCTTGCT
TACGCTGGTC TTGGCGGTGC TTACGGTGAG TTCGCATACG GTAAAACTGA AGGTGCACTA
GGCGTTATCA CTGACTTCAC AGATATCATG GCTTACCACG GTAACTCTGC AGCAGACAAA
CTAGCTGTAG CAGACCGTAC AGACAACATG ATGGCTTACA AAGGTCAATT CGAAAACCTA
AGTGTTAAAG CAAGCTACCG CTTCGCTGAC CGTGTAGAAC AAAACGGTGA ATACTCTGAT
AACAAACAAG ACGGCTACTC TCTATCAGCT ATCTACGCTG TAGCAGACAC TGGTCTTGAG
CTTGGTGCTG GTTACGCAGA CCAATACGAT GCAAACGAGT ACATGCTAGC TGCATCTTAC
ACAATGTCTG ATCTTTACTT CGCTGGTATC TTCACAGATG GCGAAAAAAT GACTGACACA
TTCAACAACA CTGTTGATTA CACTGGTTAC GAACTAGCGG GTGCTTACAC GCTAGGTCAA
ACAGTATTCA CAACGACGTA CAACAATGCA GAAACTGACA ACGAGACTTC TGCAAACAAC
TTCGCTGTTG ATGCTTCTTA CTACTTCAAA CCTAACTTCC GCGGTTACGT TTCTTACAAC
TTCAACCTAA TTGACGCTGG CGATAAGTTC GGCTCAACTA GCGGTAAGAC AGTTGCGAAC
AAGATCGATG CTGAAGACGA GCTAGCTCTA GGTCTACGTT ACGACTTCTA A
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| Protein sequence | MKKTLIALSV SAAAMATGVN AAELYNQDGT SLEMGGRAEA RLSMKDGDAQ DKSRIRLNFL
GKQEINDNLY GVGFWEGEFE TAQNGTVDGD DKSDLETRLA YAGLGGAYGE FAYGKTEGAL
GVITDFTDIM AYHGNSAADK LAVADRTDNM MAYKGQFENL SVKASYRFAD RVEQNGEYSD
NKQDGYSLSA IYAVADTGLE LGAGYADQYD ANEYMLAASY TMSDLYFAGI FTDGEKMTDT
FNNTVDYTGY ELAGAYTLGQ TVFTTTYNNA ETDNETSANN FAVDASYYFK PNFRGYVSYN
FNLIDAGDKF GSTSGKTVAN KIDAEDELAL GLRYDF
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