Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002578 |
Symbol | |
ID | 8556304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1074874 |
End bp | 1077282 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405667 |
Product | chitobiose phosphorylase |
Protein accession | YP_003285205 |
Protein GI | 262393351 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3459] Cellobiose phosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACG GCTATTTCGA TAACGAGAAT CGTGAATACG TCATTACTCG CCCTGATGTA CCTGCTCCTT GGACCAACTA CCTAGGTACA GAAAAATTCT GTACCGTTAT CTCGCATAAC GCAGGTGGCT ATTCGTTCTA CAACTCTCCA GAATACAACC GTGTTACTAA GTTCCGTCCA AATGCGACAT TCGATCGCCC AGGACACTAC GTTTACCTAC GTGATGATGA GACGGGAGAT TACTGGTCAA TCTCTTGGCA ACCAGTTACC AAAAGCCTAG ACGAAGCGAA CTACGAAGTT CGTCATGGTT TGTCGTACTC TAAATTCAAG TGTGAATACA GCGGCATTAG CGCAACCAAA ACGCTCTTTG TACCAAAAGG CGAAGATGCA GAAATTTGGG ATGTAGTAAT CAAGAACACC TCAGACAAAC CGCGTACGAT CAGCGTATTC TCATTTGTTG AGTTCTCGTT CAGCCACATT CAATCTGATA ACCAAAACCA CCAGATGTCT CTCTACTCTG CTGGTACGTC ATACAACGAA GGCGTGATTG AATACGACCT GTACTACAAC ACTAACGATT TCGAAGGCTT CTACTACCTA GCGTCAACGT TTGATCCAGA TTCATACGAC GGTCAACGTG ATAGCTTCCT AGGTCTATAC CGCGACGAAG CAAACCCACT AGCAGTAGAA CAAGGTAAGT GTTTTAACAC CGCACAAACG TGTTACAACC ACTGTGGCTC TCTGCACAAG CAATTTACTA TCCAACCAGG AGAAGAAGTT CGCTTTGCTT ACATTCTAGG TATCGGTAAA GGCAACGGTG AGCGTCTACG TGCTAAGTAC CAAGACCTTG CAGAAGTCGA CAATGCATTT GCTGGCATCA AAGCACACTG GGATGAGCGT TGTGGCAAGT TCCAAGTGAA ATCGCCAAAC GAAGGCCTAG ACACCATGAT CAATGCTTGG ACGCTATACC AAGCAGAAAC ATGTGTGGTT TGGTCTCGCT TTGCTTCGTT CATCGAAGTG GGTGGTCGTA CTGGTCTTGG TTACCGCGAT ACGGCGCAAG ACGCAATTTC CGTTCCTCAC GCGAACCCGA AAATGACTCG TAAGCGCATC GTTGATCTAC TGCGTGGTCA AGTAAAAGCG GGTTATGGCC TACACCTATT CGATCCTGAT TGGTTCGATC CTGAAAAAGC AGATGTTAAA CCATCTAAGT CTCCAACGGT TGTTCCTACT CCGTCCGATG AAGATAAGAT CCACGGTATT GAAGACACTT GCTCTGATGA TCACCTATGG CTAGTACCAA CCATCTGTAA ATACGTGATG GAAACCGGTG AGCACAGCTT CTTCGACGAA GTGATTCCTT ACGCGGATGG CGGTGATGCA ACCGTGTATG ACCACATGAA AGCTGCGCTA GACTTCTCAG CTGAATACGT GGGTCAAACG GGCATCTGTA AAGGTCTACG TGCCGACTGG AACGACTGTC TAAACCTAGG TGGCGGCGAG TCTTCAATGG TGTCTTTCCT ACACTTCTGG GCGCTACAAG AGTTCATCGA CCTTGCAAAA TACCTAGGCA AAGAAGCTGA CGTTGAGAAA TACACCGAGA TGGCGGCAAA CGTTCGCGAA GCGTGTGAAA CACACCTTTG GGACGAAGAA GGCGGCTGGT ACATTCGTGG TCTAACGAAA AACGGCGACA AGATTGGTAC AGCGCAACAA AAAGAAGGTC GTGTGCACCT TGAGTCAAAC ACTCTTGCGG TGCTGTCTGG TGCGGTATCT CAAGAGCGCG GTGAAAAGGC AATGGACGCA GTCGACGAGA ATCTATTCTC TGAATACGGC CTACATCTGA ACTCACCATC ATTCGCAACA CCAAATGATG ATATCGGCTT TGTAACGCGC GTTTACCAAG GCGTAAAAGA AAACGGTGCG ATCTTCTCAC ATCCAAACCC ATGGGCTTGG GTTGCTGAAG CAAAATTGGG GCGCGGTGAC CGTGCGATGA AGTTCTACGA TGCACTCAAC CCATACAACC AAAACGACAT CATCGAAAAA CGTATCGCAG AACCGTACTC CTACGTGCAG TTCATTATGG GTCGAGACCA CCAAGATCAC GGTCGTGCAA ACCACCCATG GCTAACTGGC ACATCTGGTT GGGCTTACTT CGCAGTGACC AACTTTATCC TTGGTGTGCG CACAGGTTTT GATGGTCTAA CTATCGATCC ATGTATTCCA ACTAACTGGC CTGGATTTGA AGTCACTCGT CAGTGGCTAG GCGCGACTTA CAACATCAAA GTTGTTAACC CTGATTCAGT CAGCAAAGGC GTGAAATCTA TCACTCTGAA CGGCGAAGCT ATCACTGGCG CATCAGTACC AGTTCAAGCG GAAGGCTCCG TGAACGAAGT GATCGTAACA CTAGGTTAA
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Protein sequence | MKYGYFDNEN REYVITRPDV PAPWTNYLGT EKFCTVISHN AGGYSFYNSP EYNRVTKFRP NATFDRPGHY VYLRDDETGD YWSISWQPVT KSLDEANYEV RHGLSYSKFK CEYSGISATK TLFVPKGEDA EIWDVVIKNT SDKPRTISVF SFVEFSFSHI QSDNQNHQMS LYSAGTSYNE GVIEYDLYYN TNDFEGFYYL ASTFDPDSYD GQRDSFLGLY RDEANPLAVE QGKCFNTAQT CYNHCGSLHK QFTIQPGEEV RFAYILGIGK GNGERLRAKY QDLAEVDNAF AGIKAHWDER CGKFQVKSPN EGLDTMINAW TLYQAETCVV WSRFASFIEV GGRTGLGYRD TAQDAISVPH ANPKMTRKRI VDLLRGQVKA GYGLHLFDPD WFDPEKADVK PSKSPTVVPT PSDEDKIHGI EDTCSDDHLW LVPTICKYVM ETGEHSFFDE VIPYADGGDA TVYDHMKAAL DFSAEYVGQT GICKGLRADW NDCLNLGGGE SSMVSFLHFW ALQEFIDLAK YLGKEADVEK YTEMAANVRE ACETHLWDEE GGWYIRGLTK NGDKIGTAQQ KEGRVHLESN TLAVLSGAVS QERGEKAMDA VDENLFSEYG LHLNSPSFAT PNDDIGFVTR VYQGVKENGA IFSHPNPWAW VAEAKLGRGD RAMKFYDALN PYNQNDIIEK RIAEPYSYVQ FIMGRDHQDH GRANHPWLTG TSGWAYFAVT NFILGVRTGF DGLTIDPCIP TNWPGFEVTR QWLGATYNIK VVNPDSVSKG VKSITLNGEA ITGASVPVQA EGSVNEVIVT LG
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