Gene VEA_002578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002578 
Symbol 
ID8556304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1074874 
End bp1077282 
Gene Length2409 bp 
Protein Length802 aa 
Translation table11 
GC content48% 
IMG OID646405667 
Productchitobiose phosphorylase 
Protein accessionYP_003285205 
Protein GI262393351 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3459] Cellobiose phosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACG GCTATTTCGA TAACGAGAAT CGTGAATACG TCATTACTCG CCCTGATGTA 
CCTGCTCCTT GGACCAACTA CCTAGGTACA GAAAAATTCT GTACCGTTAT CTCGCATAAC
GCAGGTGGCT ATTCGTTCTA CAACTCTCCA GAATACAACC GTGTTACTAA GTTCCGTCCA
AATGCGACAT TCGATCGCCC AGGACACTAC GTTTACCTAC GTGATGATGA GACGGGAGAT
TACTGGTCAA TCTCTTGGCA ACCAGTTACC AAAAGCCTAG ACGAAGCGAA CTACGAAGTT
CGTCATGGTT TGTCGTACTC TAAATTCAAG TGTGAATACA GCGGCATTAG CGCAACCAAA
ACGCTCTTTG TACCAAAAGG CGAAGATGCA GAAATTTGGG ATGTAGTAAT CAAGAACACC
TCAGACAAAC CGCGTACGAT CAGCGTATTC TCATTTGTTG AGTTCTCGTT CAGCCACATT
CAATCTGATA ACCAAAACCA CCAGATGTCT CTCTACTCTG CTGGTACGTC ATACAACGAA
GGCGTGATTG AATACGACCT GTACTACAAC ACTAACGATT TCGAAGGCTT CTACTACCTA
GCGTCAACGT TTGATCCAGA TTCATACGAC GGTCAACGTG ATAGCTTCCT AGGTCTATAC
CGCGACGAAG CAAACCCACT AGCAGTAGAA CAAGGTAAGT GTTTTAACAC CGCACAAACG
TGTTACAACC ACTGTGGCTC TCTGCACAAG CAATTTACTA TCCAACCAGG AGAAGAAGTT
CGCTTTGCTT ACATTCTAGG TATCGGTAAA GGCAACGGTG AGCGTCTACG TGCTAAGTAC
CAAGACCTTG CAGAAGTCGA CAATGCATTT GCTGGCATCA AAGCACACTG GGATGAGCGT
TGTGGCAAGT TCCAAGTGAA ATCGCCAAAC GAAGGCCTAG ACACCATGAT CAATGCTTGG
ACGCTATACC AAGCAGAAAC ATGTGTGGTT TGGTCTCGCT TTGCTTCGTT CATCGAAGTG
GGTGGTCGTA CTGGTCTTGG TTACCGCGAT ACGGCGCAAG ACGCAATTTC CGTTCCTCAC
GCGAACCCGA AAATGACTCG TAAGCGCATC GTTGATCTAC TGCGTGGTCA AGTAAAAGCG
GGTTATGGCC TACACCTATT CGATCCTGAT TGGTTCGATC CTGAAAAAGC AGATGTTAAA
CCATCTAAGT CTCCAACGGT TGTTCCTACT CCGTCCGATG AAGATAAGAT CCACGGTATT
GAAGACACTT GCTCTGATGA TCACCTATGG CTAGTACCAA CCATCTGTAA ATACGTGATG
GAAACCGGTG AGCACAGCTT CTTCGACGAA GTGATTCCTT ACGCGGATGG CGGTGATGCA
ACCGTGTATG ACCACATGAA AGCTGCGCTA GACTTCTCAG CTGAATACGT GGGTCAAACG
GGCATCTGTA AAGGTCTACG TGCCGACTGG AACGACTGTC TAAACCTAGG TGGCGGCGAG
TCTTCAATGG TGTCTTTCCT ACACTTCTGG GCGCTACAAG AGTTCATCGA CCTTGCAAAA
TACCTAGGCA AAGAAGCTGA CGTTGAGAAA TACACCGAGA TGGCGGCAAA CGTTCGCGAA
GCGTGTGAAA CACACCTTTG GGACGAAGAA GGCGGCTGGT ACATTCGTGG TCTAACGAAA
AACGGCGACA AGATTGGTAC AGCGCAACAA AAAGAAGGTC GTGTGCACCT TGAGTCAAAC
ACTCTTGCGG TGCTGTCTGG TGCGGTATCT CAAGAGCGCG GTGAAAAGGC AATGGACGCA
GTCGACGAGA ATCTATTCTC TGAATACGGC CTACATCTGA ACTCACCATC ATTCGCAACA
CCAAATGATG ATATCGGCTT TGTAACGCGC GTTTACCAAG GCGTAAAAGA AAACGGTGCG
ATCTTCTCAC ATCCAAACCC ATGGGCTTGG GTTGCTGAAG CAAAATTGGG GCGCGGTGAC
CGTGCGATGA AGTTCTACGA TGCACTCAAC CCATACAACC AAAACGACAT CATCGAAAAA
CGTATCGCAG AACCGTACTC CTACGTGCAG TTCATTATGG GTCGAGACCA CCAAGATCAC
GGTCGTGCAA ACCACCCATG GCTAACTGGC ACATCTGGTT GGGCTTACTT CGCAGTGACC
AACTTTATCC TTGGTGTGCG CACAGGTTTT GATGGTCTAA CTATCGATCC ATGTATTCCA
ACTAACTGGC CTGGATTTGA AGTCACTCGT CAGTGGCTAG GCGCGACTTA CAACATCAAA
GTTGTTAACC CTGATTCAGT CAGCAAAGGC GTGAAATCTA TCACTCTGAA CGGCGAAGCT
ATCACTGGCG CATCAGTACC AGTTCAAGCG GAAGGCTCCG TGAACGAAGT GATCGTAACA
CTAGGTTAA
 
Protein sequence
MKYGYFDNEN REYVITRPDV PAPWTNYLGT EKFCTVISHN AGGYSFYNSP EYNRVTKFRP 
NATFDRPGHY VYLRDDETGD YWSISWQPVT KSLDEANYEV RHGLSYSKFK CEYSGISATK
TLFVPKGEDA EIWDVVIKNT SDKPRTISVF SFVEFSFSHI QSDNQNHQMS LYSAGTSYNE
GVIEYDLYYN TNDFEGFYYL ASTFDPDSYD GQRDSFLGLY RDEANPLAVE QGKCFNTAQT
CYNHCGSLHK QFTIQPGEEV RFAYILGIGK GNGERLRAKY QDLAEVDNAF AGIKAHWDER
CGKFQVKSPN EGLDTMINAW TLYQAETCVV WSRFASFIEV GGRTGLGYRD TAQDAISVPH
ANPKMTRKRI VDLLRGQVKA GYGLHLFDPD WFDPEKADVK PSKSPTVVPT PSDEDKIHGI
EDTCSDDHLW LVPTICKYVM ETGEHSFFDE VIPYADGGDA TVYDHMKAAL DFSAEYVGQT
GICKGLRADW NDCLNLGGGE SSMVSFLHFW ALQEFIDLAK YLGKEADVEK YTEMAANVRE
ACETHLWDEE GGWYIRGLTK NGDKIGTAQQ KEGRVHLESN TLAVLSGAVS QERGEKAMDA
VDENLFSEYG LHLNSPSFAT PNDDIGFVTR VYQGVKENGA IFSHPNPWAW VAEAKLGRGD
RAMKFYDALN PYNQNDIIEK RIAEPYSYVQ FIMGRDHQDH GRANHPWLTG TSGWAYFAVT
NFILGVRTGF DGLTIDPCIP TNWPGFEVTR QWLGATYNIK VVNPDSVSKG VKSITLNGEA
ITGASVPVQA EGSVNEVIVT LG