| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002567 |
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| Symbol | |
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| ID | 8556293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1056878 |
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| End bp | 1059346 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405656 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_003285194 |
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| Protein GI | 262393340 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCACAAT TGCCGATTGA AGCCGTGATG CCTGAGTTGC TGACGGCGGT CAAAAATCAA
CATCAAGTGA TCTTAAAAGC GGCGCCTGGT GCCGGTAAGT CGACTTACTT CCCTTTGCAG
TTACTCTTAA ATCATTCGGT TGCTGGCAAA ATTATTATGC TTGAGCCAAG ACGACTCGCG
GCGCGTAATA TTGCCCGTTA TCTTGCTGCT CAATTGGGAG AGCAAGTAGG GCAACGCGTG
GGTTATCGAG TTCGTGGCGA GGCAAAGGTA AGTACTGCAA CGCAGTTGGA GATCGTGACT
GAAGGGATCA TGACTAGGAT GATTCAAACT GCCCCTGAAC TGGATGGTGT TGATCTGCTG
ATCTTTGATG AGTTTCATGA ACGCAGCATT CATGCCGATA CCGCTTTGGC ATTCAGTTTA
GAAGTTCAAG AGGCATTGCG AGACGATCTC AAGCTGGTGG TAATGTCGGC AACGCTTGAT
CAACAAGCCT TACAGTCGTT GTTGCCGGAA GCCAGTTACA TTGAATCAGA AGGACGCAGT
TTCGACGTAG AAATGCGTTA CCAACCGTTA GGTGTGAATG ATCATTTACC TACGAGTATG
GCAAAAACAA TAGAAAGTCT TATGAACAAA GAGTCCGGCT CTTTGTTGGC TTTCCTACCG
GGCGTTGGGG CCATTAAACA AGTCGAAGAA CGTTTATCTC ATTTGGCGGA TGATATTGAA
GTGTGTCCGC TTTACGGGCA ACTGAGCTTT ACTGAGCAAC AAAAAGCCAT CACGCCGGCA
GAACACGGCA AGCGTAAAGT CGTACTCGCG ACCAACATCG CAGAAACTTC ACTGACGATT
GAAGGCATTC GCCTTGTGGT TGATTCTGGG TTAGAGCGTA TTGCCCGGTT TGATTTGAAA
AACGGTTTAA CACGCTTAGA GCAAACACGC ATTGCACAGT CTTCAGCGAT TCAGCGTGCA
GGACGAGCGG GACGAATAGA AGAGGGCATT TGTGTTCGTC TTTATTCTGA AAGCCAGTTC
AAGCAGCAAC CGCTTGTTCC CCAACCCGAA ATTTTGCATT CCGATTTGGC TAGTTTAGTT
ATGGAGCTTG CCTTTTGGGG AGCGAGTGAT ATCCACGATC TAAAGTGGCT TGATGTTCCC
GCTAATGCGT CATTGGAACA AGCGAAGCAG CTATTGGTGT CATTGGGGCT ACTGACGGAA
AAAGGTCAAT TAACATCCGA AGGAAAACAG GCACATGAAC TAGGCGTCGA ACCTCGTGCG
GCTGCGATGC TAATCAAAGC GCAATCTTAC AGTGATAAGA TGTTAAATGC TGCTTTGGCG
GCGGTCGCAC TGATTGAAGA GCCAGAAAGA AACGTCACCA ATATCGCTCA TAGTTTGCAT
CGTTGGCTTG TTGGTACTCA TCCAAAAAAG TCGATGTTGT TCAAGCGTGC TCAATCTCTG
GCGTACAAAT TAGATACGGT ATTTGACCTG AAAGGCGTGG ATGAAGAGGT ATTACCGCTG
GTGTTAAGTT TGGCATTTCC AGATCGCATT GCGCAGCAGC GCACAAATCA ATTTGGGCGA
TTTACTTTGG CTAATGGTCA TGGTGCAGAA TGTCGTCAGG AAGACATGCT AGGCGGCTGT
GAGTATTTGG TTGCCGTTGA CTTAATGCGT TCTCATTCTA ACTCCAGTCA AATTCATTCG
GCATGTGAAT TGGATGTCAA TATATTGCGA GCGACCTTTG AAGCGCTATT TTCGTCTGAA
GAAGTCGTAG ACTGGGATGA AAAAAGAGGG CGTCTAATGG CTGAGCGACA AACAAAACTC
GGTCAGCTGG TGGTTGAACG CGAGCCTTTG CCAAGCCCTG GCAAAGAAAA AATGACACAA
GCTTTACTCA CGTATGTCCG CCGCCAGGGC TTACAGAGTC TAAACTGGAC ACCGGCAGCG
GAGAGCTTGT TGGCTCGGAT TCGTTGTGCG GTGGAATGGT TACCCGAGCA ATCATGGCCA
ATGTTTGATG AAGCCAGTTT GTTGGATTCA TTAGAAGAGT GGTTAGAGCC GTACATGACG
TCCGTCAGTT CGGTTAACGA TTTGAGCAAG ATAAACTTGG TCGAAGCGCT GAACGCTCGA
TTAGGATGGC CACTCAATCA ACAACTGGAT GAATGGTTAC CAGAGCATTA CCAACTGCCG
ACAGGTTCAA AGAAGCGTAT CCGTTACCAG TATGGCCATG AGCCGAAATT ATCGGTGCGT
ATGCAAGAGG TATTTGGTGA GAGTGGCTCC CCTACGGTAG CGCTTGGTCG CAAGCGTTTA
GTGCTTGAAC TGCTTTCACC GGCACAACGT CCGCTGCAAG TGACGTCTGA CTTGGCGGCT
TTCTGGAATG GAAGCTATAA AGACGTCCAA AAAGAGATGA AAGGGCGCTA CCCAAAACAC
GTTTGGCCAG ATGATCCTGC CAATCATGTA GCAACTACGA AAACAAAAAG ACAATTGAAT
AATGACTAA
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| Protein sequence | MSQLPIEAVM PELLTAVKNQ HQVILKAAPG AGKSTYFPLQ LLLNHSVAGK IIMLEPRRLA
ARNIARYLAA QLGEQVGQRV GYRVRGEAKV STATQLEIVT EGIMTRMIQT APELDGVDLL
IFDEFHERSI HADTALAFSL EVQEALRDDL KLVVMSATLD QQALQSLLPE ASYIESEGRS
FDVEMRYQPL GVNDHLPTSM AKTIESLMNK ESGSLLAFLP GVGAIKQVEE RLSHLADDIE
VCPLYGQLSF TEQQKAITPA EHGKRKVVLA TNIAETSLTI EGIRLVVDSG LERIARFDLK
NGLTRLEQTR IAQSSAIQRA GRAGRIEEGI CVRLYSESQF KQQPLVPQPE ILHSDLASLV
MELAFWGASD IHDLKWLDVP ANASLEQAKQ LLVSLGLLTE KGQLTSEGKQ AHELGVEPRA
AAMLIKAQSY SDKMLNAALA AVALIEEPER NVTNIAHSLH RWLVGTHPKK SMLFKRAQSL
AYKLDTVFDL KGVDEEVLPL VLSLAFPDRI AQQRTNQFGR FTLANGHGAE CRQEDMLGGC
EYLVAVDLMR SHSNSSQIHS ACELDVNILR ATFEALFSSE EVVDWDEKRG RLMAERQTKL
GQLVVEREPL PSPGKEKMTQ ALLTYVRRQG LQSLNWTPAA ESLLARIRCA VEWLPEQSWP
MFDEASLLDS LEEWLEPYMT SVSSVNDLSK INLVEALNAR LGWPLNQQLD EWLPEHYQLP
TGSKKRIRYQ YGHEPKLSVR MQEVFGESGS PTVALGRKRL VLELLSPAQR PLQVTSDLAA
FWNGSYKDVQ KEMKGRYPKH VWPDDPANHV ATTKTKRQLN ND
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