Gene VEA_002563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002563 
Symbol 
ID8556289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1053083 
End bp1054444 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content48% 
IMG OID646405652 
Productpoly(A) polymerase 
Protein accessionYP_003285190 
Protein GI262393336 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID[TIGR01942] poly(A) polymerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000329901 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAA ACGACTATAC ACCAAGCGAA CCTGCCACTA TTCCAGAGCT CGCTCTCAAT 
GTAATAACTC GTGAAGAGCA CAACATTTCG CGTAAGCAGA TCAGTGATAA TGCACTGAAG
GTACTGTACC GCCTAAATGG TGCTGGTTTC GATGCTTTTC TTGTGGGTGG CGGGGTTCGA
GACTTACTGC TTGGACAGAA ACCAAAAGAT TTTGACATTG CGACCAACGC AACGCCGGAA
CAGATCAAAC AGCTATTTCG TAACTGCCGT TTGATTGGTC GCCGCTTTCG CTTGGCTCAC
ATTATGTTTG GCCGAGACAT CATTGAGGTT GCGACATTCC GTGGTCACCA CCAAGAGCAA
AAGAACAAGA GCATCTCTCA ACAATCTAAA GAAGGAATGC TGCTGCGGGA CAATGTCTAC
GGCACCATCG ATGAAGATGC TGAGCGCCGT GATTTCACGA TTAACTCGAT GTACTACAAC
ATCGCGGATT ACTCGATTCA CGACTACGCA CGTGGTATTG AGGATTTAGA AGATCGCCTC
ATTCGACTGA TTGGCGATCC AGAAACACGC TACCGTGAAG ATCCAGTACG TATGTTGCGT
GCAGTTCGCT TCGCAGTAAA ACTGGACTTT GATATTGAAG AAGACACCGC GGCACCAATC
GAACACATGG CACCGTTGCT CGGTGACATT CCGTCAGCGC GTCTTTTTGA AGAGTCACTC
AAGTTATTGC AATCCGGTCA TGGCTTAGAA ACCTACCACC TACTGCGTGA GTACAACCTA
TTCCAGCAAC TCTTCCCGAC GATTGCAGCG CACTTCACGG AAGATTACTC CTCTTACACA
GAGCAAATGT TGGATCTCGT GTTGGATTCT ACTGACATGC GCATCGAAGA TGGGAAACGC
ATCAATCCAG CATTTATGTT TGCTGCAATG CTGTGGTACC CACTGTGTGC GAAAGCCGAT
GAACTGATGG AAGAGCGCAA CCTAGGCCAT TACGACGCTA TTATGGAAGC GAGTAACATC
ATTCTTGATG AACAAGTTCG TACAATTGCC ATTCCAAGAC GCCACACCGC AACCATTCGC
GAGATTTGGC AGTTACAGCT TCGTCTTCCA CGACGCAACG GTAAACGTGC ATTCCGTCTT
ATGGAGCTCA ATAAATTTAG AGCTGGCTTT GATTTTCTTG AAATGCGCGG TGAAATTGAA
GGTGGTGACA CTCAGAAGCT TGCCAAGTGG TGGGAAACTT TCCAAAATGC AGGCCGAGAA
ATGCGTCAAG CAATGGCTGC CGACCTAGAC GGTCAATCAC CGAAGAGTGG TCAGCGCCGC
CGTAAAACCT ATCGCAAGAA AAAGAGTAAG CCTAAGTCAT GA
 
Protein sequence
MNTNDYTPSE PATIPELALN VITREEHNIS RKQISDNALK VLYRLNGAGF DAFLVGGGVR 
DLLLGQKPKD FDIATNATPE QIKQLFRNCR LIGRRFRLAH IMFGRDIIEV ATFRGHHQEQ
KNKSISQQSK EGMLLRDNVY GTIDEDAERR DFTINSMYYN IADYSIHDYA RGIEDLEDRL
IRLIGDPETR YREDPVRMLR AVRFAVKLDF DIEEDTAAPI EHMAPLLGDI PSARLFEESL
KLLQSGHGLE TYHLLREYNL FQQLFPTIAA HFTEDYSSYT EQMLDLVLDS TDMRIEDGKR
INPAFMFAAM LWYPLCAKAD ELMEERNLGH YDAIMEASNI ILDEQVRTIA IPRRHTATIR
EIWQLQLRLP RRNGKRAFRL MELNKFRAGF DFLEMRGEIE GGDTQKLAKW WETFQNAGRE
MRQAMAADLD GQSPKSGQRR RKTYRKKKSK PKS