Gene VEA_002562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002562 
Symbol 
ID8556288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp1052601 
End bp1053086 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content48% 
IMG OID646405651 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_003285189 
Protein GI262393335 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00128417 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACAG CGTACATTGC GGTAGGCAGT AACTTGGCTG ATCCTGTCAG CCAAGCGAAG 
CAAGCGATTG AAGCGTTAAA AACGCTGCCT AAATCAGAAT TTGTTCAGGC TTCTTCGCTA 
TACAGCAGCA CGCCAATGGG ACCACAAAAC CAACCGGATT ACATCAATGC GGTTGTGTCG 
ATTAACACCA GTTTGACGCC TCTTGAGTTG CTCGATTGCA CACAAGCCAT TGAGCAAGAA 
CAAGGGCGTG TCCGTAAAGA CGAACGTTGG GGACCAAGAA CCTTGGACCT CGACATTGTT 
CTTTATGGCA ATGAGGTGAT TAATTCCGAG AGGCTGATCG TTCCTCATTA TGGAATGAAA 
GAGCGTGAAT TCGTACTCTA CCCTCTTGCG GAAATTGCAC CAAGTTTACA ACTCCCCGAT 
GGGACCGAGG TCTCTAAACT ACTGGAACAA GTAGATAGAA ACGGCCTCAG TATCTGGCAG 
TCATAG
 
Protein sequence
MITAYIAVGS NLADPVSQAK QAIEALKTLP KSEFVQASSL YSSTPMGPQN QPDYINAVVS 
INTSLTPLEL LDCTQAIEQE QGRVRKDERW GPRTLDLDIV LYGNEVINSE RLIVPHYGMK 
EREFVLYPLA EIAPSLQLPD GTEVSKLLEQ VDRNGLSIWQ S