Gene VEA_002558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002558 
Symbol 
ID8556284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1048982 
End bp1049752 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content44% 
IMG OID646405647 
ProductABC-type multidrug transport system permease component 
Protein accessionYP_003285185 
Protein GI262393331 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.644442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGGTT TATATTGGAC GGCATTTCGT AGCTTGCTGA GCAAAGAGAT CACCCGTTTT 
ACGCGCATTT GGGTGCAAAC TTTAGTTCCG CCTGCAATCA CAATGACACT GTATTTCATC
ATTTTCGGTA ATCTAATTGG CTCTCGAATC GGTGAGATGA GCGGCTTTAG CTACATGGAG
TACATAGTTC CAGGTTTGAT CATGATGTCG GTGATCACCA ATTCATACTC GAATGTGGCG
TCTTCGTTCT TTAGTGCAAA ACTACAGAAG AACATTGAAG AGCTGCTGGT GGCACCGGTG
CCAAATTACG TGATTATTGC TGGATACGTA ATGGGCGGTG TGACTCGAGG TTTGTTAGTA
GGCGCTATTG TTACCTGTGT GTCTTTATTG TTTGTGGATC TGCAAGTTGA ACACTGGGGC
ATTATTGTTG CGACCGTCTT CATGACATCC GTTGTATTTG CTCTAGGCGG GCTGATCAAT
GCGGTCTATG CAAAAACGTT TGATGATATT TCGATCATTC CTACATTTGT GTTGACCCCG
TTAACCTACT TGGGTGGTGT TTTTTATTCC ATCAGCTTAC TGCCTGAATT TTGGCAAGGT
GTCTCTAAGA TTAACCCAAT CGTCTACATG GTGAATGCGT TCCGTTATGG TTTTTTAGGC
GTATCGGATG TGGGTATTGT CACCTCATTC AGTGTGCTTG CGGTGTTTGT GATAGCGCTG
TATGCCGTTG CTCATTACTT AGTAACGAAA GGTATTGGGC TAAGAAGCTA A
 
Protein sequence
MYGLYWTAFR SLLSKEITRF TRIWVQTLVP PAITMTLYFI IFGNLIGSRI GEMSGFSYME 
YIVPGLIMMS VITNSYSNVA SSFFSAKLQK NIEELLVAPV PNYVIIAGYV MGGVTRGLLV
GAIVTCVSLL FVDLQVEHWG IIVATVFMTS VVFALGGLIN AVYAKTFDDI SIIPTFVLTP
LTYLGGVFYS ISLLPEFWQG VSKINPIVYM VNAFRYGFLG VSDVGIVTSF SVLAVFVIAL
YAVAHYLVTK GIGLRS