| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002550 |
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| Symbol | |
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| ID | 8556276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1037235 |
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| End bp | 1039898 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405639 |
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| Product | pyruvate dehydrogenase E1 component |
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| Protein accession | YP_003285177 |
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| Protein GI | 262393323 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.14515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATA TGAAGCATGA CGTAGATGCA CTGGAAACTC AAGAATGGCT ACAAGCGCTT
GAGTCAGTTG TACGTGAAGA AGGTCTAGAG CGTGCTCAAT TCCTATTAGA GCAAGTTCTA
GATAAAGCAC GTCTAGACGG TGTTGATATG CCAACAGGTA TCACAACTAA CTACATCAAC
ACGATTCCTG CAGACCAAGA ACCAGCATAC CCAGGTGACA CAACACTTGA GCGTCGTATT
CGCTCAATTA TTCGTTGGAA CGCTATCATG ATCGTTCTAC GTGCATCTAA GAAAGACCTA
GAGCTAGGCG GCCACATGGC GTCTTTCCAG TCTTCTGCTG CGTTCTACGA GACATGTTTC
AACCACTTCT TCCGTGCGCC AAACGAGAAG GACGGTGGCG ACCTAGTTTA CTACCAAGGT
CACATTTCAC CAGGTATCTA CTCACGTGCA TTCGTTGAAG GTCGTCTAAC TGAAGAGCAG
CTAGACAACT TCCGTCAAGA AGTAGACGGC AAAGGTATTC CTTCATACCC GCACCCTAAA
CTGATGCCTG AATTCTGGCA GTTCCCGACA GTATCGATGG GCCTAGGTCC AATCGCTTCT
ATCTACCAAG CTCGTTTCCT TAAGTACCTA GAAGGCCGTG GTCTTAAAGA TACTTCAGAG
CAGCGCGTTT ACGCGTTCCT AGGTGACGGT GAGATGGATG AGCCAGAATC ACGTGGTGCT
ATCTCTTTCG CTGCGCGTGA GAAACTAGAC AACCTATGTT TCCTAATCAA CTGTAACCTA
CAGCGTCTAG ATGGCCCTGT AATGGGTAAC GGTAAGATCA TTCAAGAACT TGAAGGTCTG
TTCAAAGGTG CTGGTTGGAA CGTAGTGAAG GTAATCTGGG GTAACAACTG GGATTCACTA
CTAGCTAAAG ATACTTCTGG TAAGCTTCTA CAGCTTATGA ACGAAACGAT CGATGGCGAC
TACCAAACAT TCAAATCTAA AGATGGCGCG TACGTACGTG AGCACTTCTT TGGTAAATAT
CCAGAGACAG CGGCACTTGT TGCTGACATG ACTGATGACG AAATCTTCGC ACTTAAGCGT
GGTGGTCACG AGTCTTCTAA GCTATACGCG GCATACAAAA ACGCGGCAGA AACTAAAGGT
CGTCCAACAG TAATCCTAGC TAAGACTGTT AAAGGTTACG GCATGGGTGA AGCGGCTGAA
GGTAAGAACA TCGCGCACCA AGTTAAGAAG ATGGACATGA CTCACGTACT ACACCTACGT
GATCGTCTAG GTCTTCAAGA CATCCTAACT GACGAAGCAG TGAAAGAGCT TCCGTACCTG
AAACTTGAAG AAGGTTCAAA AGAGTACGAA TACCTACACG CTCGTCGTAA AGCGCTACAC
GGCTACACAC CACAGCGTCT ACCAAAATTC ACTCAAGAAT TCATCGTTCC TGAGCTAGAA
GAATTCAAGC CACTACTAGA AGAACAGAAG CGTGATATCT CTTCTACTAT GGCATTCGTA
CGTGCACTAA ACGTTCTACT TAAGAACAAG AACATTGGTA AGAACATCGT TCCTATCATT
GCTGACGAAG CGCGTACATT CGGTATGGAA GGTCTGTTCC GTCAAATCGG TATCTACAAC
CCGCACGGCC AAACTTACAC ACCAGAAGAC CGTGGCGTTG TTTCTTACTA CAAAGAAGCG
ACTTCAGGTC AGGTTCTACA AGAAGGTATC AACGAGCTAG GTGCTATGTC TTCATGGGTT
GCTGCAGCGA CTTCATACTC GACAAACGAC CTACCAATGA TTCCGTTCTA CATTTACTAC
TCAATGTTCG GCTTCCAACG TGTTGGCGAC ATGGCGTGGA TGGCTGGTGA CCAACAAGCA
CGTGGTTTCC TACTAGGTGC AACTGCGGGT CGTACAACGT TGAACGGTGA AGGTCTACAG
CACGAAGACG GTCACTCGCA CATTTTGGCG GGTACGGTTC CTAACTGTAT TTCTTACGAC
CCAACATTCG CGTACGAAGT AGCAGTAATC ATGCAAGACG GTATCCGTCG CATGTACGGT
CCAGAACAAG AAAACGTGTT CTACTACCTA ACGCTAATGA ACGAAAACTA CGCAATGCCA
GCAATGCCAG AAGGCGCTGA AGAAGGCATC CGCAAAGGTA TCTACAAGCT AGAAACTTAC
ACGGGCGACA AAGCTAAAGT TCAGCTAATG AGCTCTGGTA CTATCATGAA TGAAGTACGT
AAAGCAGCTC AAATCCTAAG CGAAGATTAC GGTGTTGCTT CTGATGTTTA CTCTGTAACG
TCATTCAACG AACTAACTCG TGATGGTCAA GATGCAGAGC GTTTCAACAT GCTTCACCCA
GAAGCGGAAG CGAAAGTACC TTACATCCAA ACAGTAATGG GTACGGAACC TGCTATCGCA
GCAACTGACT ACATGAAGAA CTACGCAGAG CAGGTTCGTG CATACATTCC TGCTGAGTCT
TTCAAAGTTC TTGGTACTGA TGGCTTTGGT CGTTCAGACA GCCGTGAAAA CCTACGTCGT
CACTTCGAAG TGAACGCAGG TTACGTAGTA GTAGCAGCGC TAACTGAACT AGCGAAACGT
GGCGAAGTTG AGAAATCTGT AGTTGCAGAA GCAATTAAGA AATTCGACAT CGACACAGAG
AAAACAAACC CGCTATACGC TTAA
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| Protein sequence | MSDMKHDVDA LETQEWLQAL ESVVREEGLE RAQFLLEQVL DKARLDGVDM PTGITTNYIN
TIPADQEPAY PGDTTLERRI RSIIRWNAIM IVLRASKKDL ELGGHMASFQ SSAAFYETCF
NHFFRAPNEK DGGDLVYYQG HISPGIYSRA FVEGRLTEEQ LDNFRQEVDG KGIPSYPHPK
LMPEFWQFPT VSMGLGPIAS IYQARFLKYL EGRGLKDTSE QRVYAFLGDG EMDEPESRGA
ISFAAREKLD NLCFLINCNL QRLDGPVMGN GKIIQELEGL FKGAGWNVVK VIWGNNWDSL
LAKDTSGKLL QLMNETIDGD YQTFKSKDGA YVREHFFGKY PETAALVADM TDDEIFALKR
GGHESSKLYA AYKNAAETKG RPTVILAKTV KGYGMGEAAE GKNIAHQVKK MDMTHVLHLR
DRLGLQDILT DEAVKELPYL KLEEGSKEYE YLHARRKALH GYTPQRLPKF TQEFIVPELE
EFKPLLEEQK RDISSTMAFV RALNVLLKNK NIGKNIVPII ADEARTFGME GLFRQIGIYN
PHGQTYTPED RGVVSYYKEA TSGQVLQEGI NELGAMSSWV AAATSYSTND LPMIPFYIYY
SMFGFQRVGD MAWMAGDQQA RGFLLGATAG RTTLNGEGLQ HEDGHSHILA GTVPNCISYD
PTFAYEVAVI MQDGIRRMYG PEQENVFYYL TLMNENYAMP AMPEGAEEGI RKGIYKLETY
TGDKAKVQLM SSGTIMNEVR KAAQILSEDY GVASDVYSVT SFNELTRDGQ DAERFNMLHP
EAEAKVPYIQ TVMGTEPAIA ATDYMKNYAE QVRAYIPAES FKVLGTDGFG RSDSRENLRR
HFEVNAGYVV VAALTELAKR GEVEKSVVAE AIKKFDIDTE KTNPLYA
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