| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002547 |
|---|
| Symbol | |
|---|
| ID | 8556273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1034482 |
|---|
| End bp | 1035369 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646405636 |
|---|
| Product | quinolinate phosphoribosyltransferase (decarboxylating) |
|---|
| Protein accession | YP_003285174 |
|---|
| Protein GI | 262393320 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACA CACACAACAT TCAAAAACGC CTAGAATACC TTAAACAACA ACTCCCTTTA
GAGATCACTC GCTCTGTCGC TGATACCTTA AAAGAAGATC TAGGTGGCAG TGTCGACGTA
GATAACGACA TTACTGCATC TTTGATCCCT GCCGAGGCAG TTAATACCGC AACGATTATT
ACTCGCGAGC ATGGTGTGTT CTGTGGTCAA GCATGGGCTG ATGAAGTTTT TAAACAGCTC
GGTGGTAAGG TCAGCATTGA ATGGCACGTA AAGGACGGCG ATAAAGTCGA ACCTAACCAA
ACCCTTTGTA CGCTGACAGG CCCTGCTCGT GACTTGTTAA CTGGTGAGCG TAACGCAATG
AACTTCATCC AAACGCTGTC TGGCTGCGCA ACAGTTACCG CAGAGTACGC TGAAAAAATC
GCGCATACTG AGTGTCGTCT ACTAGACACA CGCAAAACCA TTCCTGGTCT GCGTAGCGCA
CTAAAATACG CCGTGACGTG CGGTGGTGGC TTTAACCATC GCATCGGTGT GTTCGACGCT
TACCTTATTA AAGAAAACCA CATTATTGCT TGTGGTGGCA TCACTCAAGC CATCCAAAAA
GCGAAAGAGC TTAACCCTGG CAAACCGGTA GAAGTAGAAA CGGAAAGCTT AGAAGAGTTG
AAACAAGCGA TAGACGCTGG TGCCGACATC ATCATGCTCG ATAACTTCAC GAAAGAAATG
ATGCGTGAAG CCGTAGCGAT TAATGCAGGT CGTGCCGCTT TAGAAAACTC CGGCAATATT
ACGCTAGAGA CCATCGCAGA ATACGCAGAA ACCGGTGTCG ATTACATTTC GGTAGGCGCG
TTGACTAAGC ATCTAAAAGC GATGGATCTT TCGATGCGCT TCAAATAA
|
|---|
| Protein sequence | MKNTHNIQKR LEYLKQQLPL EITRSVADTL KEDLGGSVDV DNDITASLIP AEAVNTATII
TREHGVFCGQ AWADEVFKQL GGKVSIEWHV KDGDKVEPNQ TLCTLTGPAR DLLTGERNAM
NFIQTLSGCA TVTAEYAEKI AHTECRLLDT RKTIPGLRSA LKYAVTCGGG FNHRIGVFDA
YLIKENHIIA CGGITQAIQK AKELNPGKPV EVETESLEEL KQAIDAGADI IMLDNFTKEM
MREAVAINAG RAALENSGNI TLETIAEYAE TGVDYISVGA LTKHLKAMDL SMRFK
|
|---|
| |