| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002545 |
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| Symbol | |
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| ID | 8556271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1032056 |
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| End bp | 1033741 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405634 |
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| Product | type 4 fimbrial assembly ATPase PilB |
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| Protein accession | YP_003285172 |
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| Protein GI | 262393318 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.255614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGACCA ACCTATCCAC GGCTCTTCGC CAAAAAGGGT TACTGACCTT TTCCCAAGAA
GAATCGTTAA TAGAGCAAGT CAAAGCTTCT GGCATTTCGA TGCCAGAGGC TTTACTCAGT
TCTGGATTAT TGACATCAAG CGAACTCGCT GAGCACTTAA GTTCTCTCTT TAGTTTGAGT
CAGCCCGAGT TATCTCAGTA TGAGTACGCT TCGCTTTGTC AACAACTCGG TCTACGTGAA
TTAATCACTC GACATAACGC ACTCCCACTC CAGCGTACGC CTTCAACTTT GTTATTAGCC
GTTGCCGACC CGACGAACCA ACAAACAGAA GATGACTTTC GTTTTGCGAC AGGGTTACAG
GTTGAACTAG TCTTGGCGGA TTTTCGTCAA CTCAGCGCGG CAATTCGACG CTTGTATGGT
CGTTCATTGA GTCATGAGAA GTCTGGATTA AAAGAGATCA ACCAAGAAGA GTTAGCCAAT
CTGGTTGACG TGGGCGCAGA TGAAATCGAT AACATTGAAG ACTTGAGCCA AGATGAGTCT
CCTGTTAGCC GTTACATAAA CCAAATTCTG TTGGACGCTG TGCGCAAAGG CGCATCCGAT
ATCCACTTTG AACCTTATGA AAAGATGTAC CGCGTTCGCC TACGCTGTGA TGGCATCTTA
ATTGAAACAC AGCAGCCACC AAGCCACTTA AGTCGCCGCT TATCCGCTCG TATCAAAATC
CTCTCTAAGC TTGATATTGC AGAGCGACGT TTACCACAAG ATGGGCGTAT TAAGCTCAAG
TTGAATCAAG ACACCGCGAT TGATATGCGT GTATCCACGC TACCGACTCT ATTCGGAGAG
AAAATTGTAT TACGACTGCT CGACAGCAGC TCTGCGTCAC TGGATATCGA CAAGCTTGGT
TATAGCGAAC AACAAAAACA ATTGTACTTG GATGCGCTGC GTCGCCCACA AGGCATGATT
CTGATGACAG GCCCTACCGG GAGCGGAAAA ACCGTTTCTC TGTACACTGG GCTGAGTATT
CTCAATAAGC CAGAAATCAA CATTTCCACA GCAGAAGATC CGGTAGAAAT TAACTTATCG
GGCATTAACC AAGTACAAGT ACAACCCAAG ATCGGCTTTG GCTTCGCAGA GGCATTGCGC
TCTTTTCTTC GTCAAGACCC CGATGTGGTA ATGGTCGGTG AGATTCGTGA CTTAGACACT
GCGGAAATCG CCATAAAAGC ATCGCAAACC GGTCACTTAG TACTTTCAAC CTTACATACC
AATTCTGCGG CTGAAACGGT GATTCGTTTA TCAAACATGG GAGTAGAAAG CTTTAACTTG
GCCTCCTCTC TTAGTTTGAT TATTGCCCAG CGCTTAGCCC GTAAACTGTG CTCGGTCTGC
AAGCAACCAC AAGAGCTTAC CGTTCAGTTG CAACATCTCG GTATTCAAGC AAGCGACAAC
ATTTTTAAAG CCAATCCCGA CGGATGCAAT GAATGTACTC ATGGTTACTC CGGCCGAACG
GGGATTTATG AAGTGATGCG CTTTGATGAA TTTCTTTCCG AAGCGCTTAT TAAAGGCGCG
TCGGTACATG AACTAGAAAA ACTCGCCATC GCAAATGGTA TGAGCACGTT ACAAATGTCG
GGCATAGAAA AACTCAAACA AGGGATCACA AGTTTTAGTG AACTACAGCG CGTACTTTAT
TTTTAA
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| Protein sequence | MLTNLSTALR QKGLLTFSQE ESLIEQVKAS GISMPEALLS SGLLTSSELA EHLSSLFSLS
QPELSQYEYA SLCQQLGLRE LITRHNALPL QRTPSTLLLA VADPTNQQTE DDFRFATGLQ
VELVLADFRQ LSAAIRRLYG RSLSHEKSGL KEINQEELAN LVDVGADEID NIEDLSQDES
PVSRYINQIL LDAVRKGASD IHFEPYEKMY RVRLRCDGIL IETQQPPSHL SRRLSARIKI
LSKLDIAERR LPQDGRIKLK LNQDTAIDMR VSTLPTLFGE KIVLRLLDSS SASLDIDKLG
YSEQQKQLYL DALRRPQGMI LMTGPTGSGK TVSLYTGLSI LNKPEINIST AEDPVEINLS
GINQVQVQPK IGFGFAEALR SFLRQDPDVV MVGEIRDLDT AEIAIKASQT GHLVLSTLHT
NSAAETVIRL SNMGVESFNL ASSLSLIIAQ RLARKLCSVC KQPQELTVQL QHLGIQASDN
IFKANPDGCN ECTHGYSGRT GIYEVMRFDE FLSEALIKGA SVHELEKLAI ANGMSTLQMS
GIEKLKQGIT SFSELQRVLY F
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