| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002535 |
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| Symbol | |
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| ID | 8556261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1023897 |
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| End bp | 1025279 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405624 |
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| Product | signal recognition particle subunit Ffh SRP54 |
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| Protein accession | YP_003285162 |
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| Protein GI | 262393308 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.600573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAGA ATTTAACGGA TCGATTATCC AAAACGCTGA AAAATATCAG TGGCAAAGGT
CGTCTGACCG AAGACAACAT TAAAGAGACC CTACGTGAAG TACGAATGGC CTTACTTGAA
GCTGACGTTG CGCTTCCGGT TGTTCGTGAA TTTGTTAACC GCGTTAAAGA AAAAGCGGTA
GGTGTAGAAG TTTCTAAATC TCTGACTCCA GGTCAGGAAT TTATCAAGAT CGTTCAAACA
GAACTTGAAG CCGTAATGGG TGAGTCGAAT GAGGCGCTAA ACCTTGCCGC TCAACCACCT
GCTGTGCTTC TTATGGCGGG TCTACAAGGT GCGGGTAAAA CCACATCGGT AGGTAAGCTA
TCTAAGCTTT TAAAAGAACG TGACAAGAAG AAAGTCTTGG TTGTGTCTGC CGACGTTTAC
CGCCCTGCGG CAATCAAGCA GCTTGAAACG CTGGCATCAG ACATCGGTGT TGACTTCTTC
CCTTCATCAC CAGATCAGAA GCCTATTGAT ATCGCCAATG CAGCGATTGA CCATGCGAAG
AAAAAATTCT ACGACGTATT GATTGTCGAT ACCGCAGGTC GCTTGGCGAT TGATGAAGAG
ATGATGGGGG AGATCAAAGA TCTTCACGCA GCTATCAACC CAGTAGAAAC GCTATTTGTT
GTTGACGCTA TGACGGGTCA AGATGCAGCA AATACAGCAA AAGCCTTTGG CGATGCGCTA
CCTCTTACTG GTGTGGTTCT AACTAAAGTT GATGGTGATG CTCGTGGTGG TGCGGCACTG
TCAGTACGCC ATGTAACGGG CAAACCAATC AAATTCTTGG GTGTCGGTGA AAAAACTGAC
GCGCTAGAAC CGTTCCATCC AGATCGTGTT GCTTCACGTA TTCTTGGTAT GGGTGACGTT
CTGTCTTTAA TTGAAGACCT ACAACGCAAC GTTGACCAAG AAAAAGCAGA AAAGCTGGCG
AAGAAGTTCA AAGAGAAGAA AGGTTTCGAC CTTGAAGATT TCCGTGAACA GCTAGGCCAG
ATGCAAAACA TGGGCGGCAT GATGGGCATG ATGGATAAGC TTCCTGGCAT GTCTCAGCTA
CCAGACAATG TGAAAGACAA AGTCGATGAC AAGATGTTCA AACAGATGGA AGCGATCATC
AGCTCCATGA CAATGAAAGA ACGTCAACGC CCAGAGATTA TCAAAGGCTC GCGCAAGAAG
CGTATTGCGG CTGGTTCTGG TGTGCAGGTT CAAGACGTAA ACCGCTTACT AAAACAGTTC
ACCCAAATGC AGAAGATGAT GAAAAAGATG CAAAAAGGTG GCATGAAAGG CATGATGCGC
AACATGCAAG GCATGATGGG CGGCATGGGT GGAGGCGGTG GCTTTAACCC ATTTGGTCGT
TAA
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| Protein sequence | MFENLTDRLS KTLKNISGKG RLTEDNIKET LREVRMALLE ADVALPVVRE FVNRVKEKAV
GVEVSKSLTP GQEFIKIVQT ELEAVMGESN EALNLAAQPP AVLLMAGLQG AGKTTSVGKL
SKLLKERDKK KVLVVSADVY RPAAIKQLET LASDIGVDFF PSSPDQKPID IANAAIDHAK
KKFYDVLIVD TAGRLAIDEE MMGEIKDLHA AINPVETLFV VDAMTGQDAA NTAKAFGDAL
PLTGVVLTKV DGDARGGAAL SVRHVTGKPI KFLGVGEKTD ALEPFHPDRV ASRILGMGDV
LSLIEDLQRN VDQEKAEKLA KKFKEKKGFD LEDFREQLGQ MQNMGGMMGM MDKLPGMSQL
PDNVKDKVDD KMFKQMEAII SSMTMKERQR PEIIKGSRKK RIAAGSGVQV QDVNRLLKQF
TQMQKMMKKM QKGGMKGMMR NMQGMMGGMG GGGGFNPFGR
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