| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002517 |
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| Symbol | |
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| ID | 8556233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 999292 |
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| End bp | 1001853 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405596 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_003285144 |
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| Protein GI | 262393290 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.919799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGCTG AACAAAAACA CACTCCGATG ATGCAGCAAT ACCTCAAGCT AAAAGCTGAG
AACCCTGAGA TTTTGCTGTT CTACCGCATG GGCGATTTCT ACGAACTCTT TTACGATGAT
GCAAAGCGAG CATCCCAACT GCTTGATATT TCGCTAACTA AGCGCGGTTC GTCAGCTGGA
GAGCCTATTC CTATGGCGGG AGTGCCATTT CACGCAGTAG AAGGCTATCT AGCAAAACTT
GTTCAGCTTG GTGAATCAGT CGCAATCTGT GAACAAATTG GCGATCCAGC CACCAGCAAA
GGTCCGGTAG AACGTAAAGT TGTGCGTATC GTGACACCAG GCACTGTTAC TGATGAAGCA
TTGCTTTCTG AGCGTGTCGA TAACTTAATC GCAGCCATTT ACCATCACAA CGGTAAGTTC
GGTTATGCTA CGCTGGATGT CACTTCTGGT CGCTTCCAAC TGACAGAACC AGAAACCGAA
GAAGCGATGA CAGCCGAGCT TCAGCGTACC GCACCACGTG AGCTACTATT CCCAGAAGAC
TTTGAACCTG TACATTTAAT GGCGAGCCGC AACGGTAACC GTCGTCGCCC AGTATGGGAA
TTTGAGCTTG ATACGGCTAA GCAACAACTC AATCAACAGT TTGGCACCAA AGATCTGGTT
GGTTTTGGCG TAGAACATGC GTCCTTAGGG TTATGTGCTG CTGGTTGTTT GATCCAGTAT
GTGAAAGATA CGCAACGCAC GGCTTTACCT CATATTCGCT CTTTAACGTT TGATCATCAG
GACCAATCCG TCATCCTTGA TGCCGCTACC CGACGCAACC TGGAAATTAC TCAAAATCTA
GCAGGCGGAA CCGATAACAC GCTCGCTGCG GTACTCGACC ATTGTGCGAC GCCGATGGGC
AGCCGAATGC TGAAGCGTTG GTTGCATCAA CCTATGCGTT GCATTGAAAC GTTAAACAAT
CGTCTTGATG CGATTGGTGA GATTAAAGAA CAAGCGCTGT TTGCCGATCT TCAACCAACG
TTAAAACAAA TTGGTGATAT TGAACGTATC TTAGCACGCC TTGCACTGCG CTCTGCTCGC
CCTCGCGATA TGGCTAGACT TCGCAATGCC ATGCAGCAGC TACCAGAGCT AGAATCTGTA
ACCGCTTCTT TGACCCATCC ATATCTAGCA AAACTGGCGC AATACGCAGC TCCGATTGAC
GAAGTATGTG ATCTGTTAGA GCGTGCGATT AAAGAAAATC CGCCGGTTGT TATTCGTGAT
GGTGGTGTGA TCGCTGAAGG CTATAATGCC GAGCTCGATG AATGGCGCAA ATTAGCAGAC
GGTGCAACAG AATACCTTGA GCAGCTTGAG CGAGATGAGC GTGAACGACA CGGCATCGAT
ACGCTTAAAG TCGGCTACAA CAACGTACAT GGCTTCTTTA TTCAAGTGAG CCGTGGCCAG
AGCCATTTGG TTCCACCGCA CTATGTGCGT CGCCAAACAC TCAAAAATGC CGAACGCTAT
ATCATCCCAG AGCTCAAAGA GCACGAAGAC AAAGTACTTA ATTCGAAATC GAAAGCGCTG
GCACTTGAAA AGCAGCTGTG GGAAGAACTG TTTGATCTAT TGATGCCAAA CTTGGAGAAG
TTGCAGAATT TAGCTTCTGC TCTGTCTCAA CTGGATGTAC TACAAAACCT AGCAGAACGT
GCAGATTCCT TGGATTACTG CCGACCAACG CTTGTGAAAG ACGCTGGCAT TCACATTCAA
GCGGGTCGTC ACCCAGTCGT AGAGCAAGTA ACAACAGAAC CGTTCATTGC TAACCCAATA
GAGCTTAACC CAGCTCGTAA GATGTTGATC ATCACCGGTC CAAACATGGG TGGTAAATCC
ACCTACATGC GTCAAACTGC GCTGATTGCA TTGATGGCAC ATATCGGCTC TTATGTACCT
GCAGAATCTG CACAAATTGG TTCTTTAGAT CGTATATTTA CTCGTATTGG TGCGTCAGAT
GATCTTGCAT CTGGTCGTTC GACCTTCATG GTAGAAATGA CGGAAACCGC TAATATTCTG
CACAATGCGA CTAAAAACAG TTTAGTGCTA ATGGATGAAA TCGGTCGTGG TACCAGTACT
TACGATGGCC TCTCTTTAGC TTGGGCAAGT GCGGAATGGC TCGCAACACA AATTGGTGCG
ATGACACTAT TTGCAACTCA CTACTTCGAA TTGACAGAGT TGCCAAACCA ACTGCCAAAC
TTAGCGAACG TTCACTTGGA TGCGGTAGAG CATGGAGACA GCATTGCCTT TATGCACGCA
GTTCAAGAAG GTGCGGCAAG TAAGTCTTAC GGCCTAGCTG TTGCGGGCTT AGCCGGCGTA
CCCAAAACGG TCATCAAAAA TGCGCGTAAC AAGCTATCTC AGCTAGAGCA ACTAGGGCAA
AACAGTGACG CACCACGTCC AAGTGCAGTA GATGTGGCTA ACCAATTGAG TCTAATTCCA
GAACCTAGCG AGATCGAACA AGCCTTATCT GGTATTGATC CTGATGATTT GACTCCACGC
CAAGCACTTG AAGAGTTGTA TCGTTTGAAG AAGATGCTTT AA
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| Protein sequence | MKAEQKHTPM MQQYLKLKAE NPEILLFYRM GDFYELFYDD AKRASQLLDI SLTKRGSSAG
EPIPMAGVPF HAVEGYLAKL VQLGESVAIC EQIGDPATSK GPVERKVVRI VTPGTVTDEA
LLSERVDNLI AAIYHHNGKF GYATLDVTSG RFQLTEPETE EAMTAELQRT APRELLFPED
FEPVHLMASR NGNRRRPVWE FELDTAKQQL NQQFGTKDLV GFGVEHASLG LCAAGCLIQY
VKDTQRTALP HIRSLTFDHQ DQSVILDAAT RRNLEITQNL AGGTDNTLAA VLDHCATPMG
SRMLKRWLHQ PMRCIETLNN RLDAIGEIKE QALFADLQPT LKQIGDIERI LARLALRSAR
PRDMARLRNA MQQLPELESV TASLTHPYLA KLAQYAAPID EVCDLLERAI KENPPVVIRD
GGVIAEGYNA ELDEWRKLAD GATEYLEQLE RDERERHGID TLKVGYNNVH GFFIQVSRGQ
SHLVPPHYVR RQTLKNAERY IIPELKEHED KVLNSKSKAL ALEKQLWEEL FDLLMPNLEK
LQNLASALSQ LDVLQNLAER ADSLDYCRPT LVKDAGIHIQ AGRHPVVEQV TTEPFIANPI
ELNPARKMLI ITGPNMGGKS TYMRQTALIA LMAHIGSYVP AESAQIGSLD RIFTRIGASD
DLASGRSTFM VEMTETANIL HNATKNSLVL MDEIGRGTST YDGLSLAWAS AEWLATQIGA
MTLFATHYFE LTELPNQLPN LANVHLDAVE HGDSIAFMHA VQEGAASKSY GLAVAGLAGV
PKTVIKNARN KLSQLEQLGQ NSDAPRPSAV DVANQLSLIP EPSEIEQALS GIDPDDLTPR
QALEELYRLK KML
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