| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002499 |
|---|
| Symbol | |
|---|
| ID | 8556215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 979955 |
|---|
| End bp | 980686 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646405578 |
|---|
| Product | DNA recombination and repair protein RecO |
|---|
| Protein accession | YP_003285126 |
|---|
| Protein GI | 262393272 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATC TGTCTTCCGA AGGTTTACAG CGCTGTTTTG TTTTACATCG CCGCCCTTAC
AGTGAATCGA GCTTAATCCT TGATGTATTT AGTGAGGAAT ATGGCCGAAT GACTTTAATG
GCCAAAGGCG CGCGCAGTAA GCGTTCGAAC TTAAAAGGCG CATTGCAACC TTTTACTCCG
CTGTTACTTA AATGGTCGGG AAAAGGTTCA ATGAAGACTT TGCGTCAAGC TGAGCCGATA
AGCCTAGGCT TACCGTTAAC GGGCATTAAT CTCTACTCAG CCATGTACGT CAATGAACTG
ATTGGCCGTA TCTTGATGGC TGAAGTGCCA ATGCCAGCGC TATTTCATGA TTATTTGCAT
GCGTTAACAG AGTTGGCACA CAACGAGAAC CCTGAGCCAG CACTGCGTCG TTTTGAGTTA
GCATTGCTCT CTTCTATGGG GTATGGCGTG GATTTCTTGC ACTGTGCAGG TACTGGCGAG
CCCGTCGACC CAGAGATGAC GTATCGTTAC CGGGAACAAA AAGGCTTCAT AGCTTCGGTT
AGGCGCGATA ACCTTACGTT TTTAGGGAAT GAGCTGATTG CTATCAGTGA GCGGCGGTTC
GTCACTAAAG AGCAGCTAAA AGCGGCAAAA CGCTTTACAC GTATAGCCTT AAAGCCGTAT
CTTGGCGGCA AACCTTTAAA AAGTCGTGAA TTTTTCATTC AGACCCCCAG AGCACGGAGT
AACGGAAAAT GA
|
|---|
| Protein sequence | MSNLSSEGLQ RCFVLHRRPY SESSLILDVF SEEYGRMTLM AKGARSKRSN LKGALQPFTP
LLLKWSGKGS MKTLRQAEPI SLGLPLTGIN LYSAMYVNEL IGRILMAEVP MPALFHDYLH
ALTELAHNEN PEPALRRFEL ALLSSMGYGV DFLHCAGTGE PVDPEMTYRY REQKGFIASV
RRDNLTFLGN ELIAISERRF VTKEQLKAAK RFTRIALKPY LGGKPLKSRE FFIQTPRARS
NGK
|
|---|
| |