Gene VEA_002497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002497 
Symbol 
ID8556213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp978207 
End bp978884 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content47% 
IMG OID646405576 
Productribonuclease III 
Protein accessionYP_003285124 
Protein GI262393270 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.186598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTC CAATTGATAA ACTAGAGAGA AAGCTCGGCT ACCAGTTTCA AGATGCCGGG 
CTTATCAACT TGGCGCTGAC TCACCGCAGC GCCAACAGTA AGCATAATGA ACGTCTTGAG 
TTTCTGGGCG ATTCAATTTT AAGTTTTGTC ATCGCTGATG ATCTGTACCA TCGTTTCCCG 
AAAGTGAACG AGGGTGACAT GAGCCGTATG CGTGCTACTT TGGTTCGCGG ACATACATTG 
GCGGAACTGG GTCGTGAATT CGATCTAGGA GATTATTTAA AATTAGGTCC AGGTGAATTG 
AAGAGTGGCG GTTTCCGCCG AGACTCTATT TTAGCCGATG CGGTTGAAGC CATTATTGGC 
GCAATTTACC TAGACAGCGA TCTTGAAGTC GTGCGAGGCA TTGTATTGAG TTGGTACAAC 
TCACGCCTTG AAGCCATTAA ACCTGGCGTC TCACAAAAAG ATCCGAAAAC TCGCCTACAA 
GAGTTCCTAC AAGGCAGAAG AAAACCGCTG CCTGTGTACA CAGTGACTAA TATTAAAGGT 
GAAGCGCACA ACCAAGAGTT TACGGTTGAG TGTGAAGTAG CAGGTGTGGA CAAGCCTGTA 
ATCGGGAAAG GCACCAGCCG CCGCAAGGCA GAACAAGCGG CTGCTGAAAC AGCACTTGAG 
CAATTAACAA ATGGCTGA
 
Protein sequence
MNSPIDKLER KLGYQFQDAG LINLALTHRS ANSKHNERLE FLGDSILSFV IADDLYHRFP 
KVNEGDMSRM RATLVRGHTL AELGREFDLG DYLKLGPGEL KSGGFRRDSI LADAVEAIIG 
AIYLDSDLEV VRGIVLSWYN SRLEAIKPGV SQKDPKTRLQ EFLQGRRKPL PVYTVTNIKG 
EAHNQEFTVE CEVAGVDKPV IGKGTSRRKA EQAAAETALE QLTNG