Gene VEA_002496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002496 
Symbol 
ID8556212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp977287 
End bp978186 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content45% 
IMG OID646405575 
Productsignal peptidase I 
Protein accessionYP_003285123 
Protein GI262393269 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0519159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATA CATTCTCACT GATGTTGGTT ATTGCGACTT TGGTAACTGG CGTAGTTTGG 
CTACTGGAAA AGCTGGTTTT CGCGAAAAAG CGTCAGGAAA AACTGGCTGA GATTCAAGCT
CAGACGTCTA ATGGTTTGGA TGCAGTGACT TTGCAAAAAG TTGAGCGTCA GCCTTGGTGG
GTTGAAAATA GCGTCTCAAT TTTTCCTGTG ATTGCGTTCG TTTTAGTATT ACGTTCTTTT
ATCTACGAAC CATTTCAAAT CCCATCAGGC TCAATGATGC CGACTTTGTT GGTGGGTGAC
TTTATCTTGG TAGAAAAATA CGCCTATGGC TTGAAAGATC CGGTATGGCG CACGCAGTTA
GTTGAAACAG GTAAACCTGA GCGTGGTGAT ATCGTGGTAT TCAAATACCC GCCACAACCA
AGTGTGGATT ACATTAAGCG TGTTGTTGGT TTGCCTGGTG ATATCGTGCG TTATTCAAGT
GATAAGCAGC TTTGCGTGCA AAGCCAAGGC GAATCGGCGT GTAAACCAGT TAAACTGAGC
AATGTTGAAG AAAGTCAGTT TAGCTCGAAC GGTATTCCAA TGATCCAACT GGATGAAAAA
TTGGGTAACG TGGAGCACAA TATTTTGGTT AACCCTCTTG TTCGTAACCG TGTGGAGCAA
TACTTCCCAC GTAGCGGCAC GACAGAGTGG GTTGTACCAC AAGGTCAGTA CTTTGTGATG
GGTGATAACC GTGACAACAG TGCTGACAGC CGTTACTGGG GCTTCGTTCC TGAAGCAAAC
TTAGTCGGCA AAGCTGTCGC CATTTGGATC AGCTTCGAGT TTGATCGTGG CGCAGATAGC
GTTCTACCTT CATGGATTCC AACTGGTGTG CGTTTTAACC GCATCGGTGG TATTCACTAA
 
Protein sequence
MANTFSLMLV IATLVTGVVW LLEKLVFAKK RQEKLAEIQA QTSNGLDAVT LQKVERQPWW 
VENSVSIFPV IAFVLVLRSF IYEPFQIPSG SMMPTLLVGD FILVEKYAYG LKDPVWRTQL
VETGKPERGD IVVFKYPPQP SVDYIKRVVG LPGDIVRYSS DKQLCVQSQG ESACKPVKLS
NVEESQFSSN GIPMIQLDEK LGNVEHNILV NPLVRNRVEQ YFPRSGTTEW VVPQGQYFVM
GDNRDNSADS RYWGFVPEAN LVGKAVAIWI SFEFDRGADS VLPSWIPTGV RFNRIGGIH