Gene VEA_002474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002474 
Symbol 
ID8556190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp956475 
End bp957341 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content43% 
IMG OID646405553 
Productsmall-conductance mechanosensitive channel 
Protein accessionYP_003285101 
Protein GI262393247 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGTG AATCGGTGGG TATCGATACC ACTTTAACGG ATGGTCTAAC TCAGGCTGAA 
ACTTGGCTGA CAAACAACTC AGATCTACTG GTTCAGTACG GTGTGAACAT TATCTCTGCG
CTGCTTATTC TGTTTATCGG TAATATTATC GTTAAAGCAG TCGCTGGTAG TGTTTCTAAA
GTACTAGAAA AGAAAAACAT GGATAAGGCT GTCGTTGAAT TTATTCACGG TCTTGTTCGT
TACTTGCTAT TTGTAATCGT ACTTATCGCA GCTCTTGGTC GATTAGGCGT TCAAACCGCT
TCAGTCGTGG CTGTAATCGG TGCGGCAGGT CTTGCTGTTG GTCTTGCGCT ACAAGGTTCA
CTATCAAACT TTGCAGCTGG TGTACTCATT GTTGCGTTCC GTCCATTCAA ATCTGGCGAC
TACGTAGAAA TTGGCGGTGT AGCGGGTAGT GTTGAAGCAA TTCAAATCTT CCAAACTGTT
CTAAAAACAC CAGACAACAA GATGGTTGTT GTGCCTAACT CGTCAGTAAT CGGTGGTGCA
ATTACTAACT ACTCTCGTCA TGCAACGCGA CGTGTCGACT TAGTGATTGG TGTGTCATAC
AAAGCGGATC TTAAACTAAC GAAGAAAGTA ATTCGCGAGA CGCTAGAAAA AGATCCGCGT
ATCTTGAAAG ATCCTGATAT CACAATCGGC GTACTTACGC TGGCAGACTC TTCAGTAAAC
TTTGTGGTTC GCCCATGGGT GAAAACTGCA GATTACTGGG GCGTATACTT TGATGCAATG
CAAGGTATTA AAGAAGCATT GGATGAAAAT GGTATCGAAA TTCCATTCCC ACAAATGGAT
GTTCATCTGA ACAAAATCGA CGCTTAA
 
Protein sequence
MAGESVGIDT TLTDGLTQAE TWLTNNSDLL VQYGVNIISA LLILFIGNII VKAVAGSVSK 
VLEKKNMDKA VVEFIHGLVR YLLFVIVLIA ALGRLGVQTA SVVAVIGAAG LAVGLALQGS
LSNFAAGVLI VAFRPFKSGD YVEIGGVAGS VEAIQIFQTV LKTPDNKMVV VPNSSVIGGA
ITNYSRHATR RVDLVIGVSY KADLKLTKKV IRETLEKDPR ILKDPDITIG VLTLADSSVN
FVVRPWVKTA DYWGVYFDAM QGIKEALDEN GIEIPFPQMD VHLNKIDA