| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002458 |
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| Symbol | |
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| ID | 8556174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 937972 |
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| End bp | 939012 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405537 |
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| Product | twitching motility protein PilT |
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| Protein accession | YP_003285085 |
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| Protein GI | 262393231 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCA CTGAGTTACT GGATTTTAGT GTAAAACATA ATGCCTCGGA TCTACATCTT
TCTGCAGGTG TCCCACCAAT GGTTCGTATT GATGGGGATG TGAGAAAACT AGGCATTCCA
GCGTTTACAC ACCAAGAAGT GCATCGTTTG GTTTTCGAAA TCATGAACGA TGCCCAACGC
AGTGAGTTCG AAGAAAAACT CGAAGTCGAC TTCTCTTTTG AGTTGCATAA CGTTGGTCGT
TTCCGTGTCA ACGCTTTCAA CCAATCTCGT GGCTGTGCGG CAGTATTCCG TACCATTCCA
AGTAGCATTC CAACTTTGGA AGAGCTGGAA GCTCCCGAGA TCTTCAAAAA AATTGCGAAC
GCTGAAAAAG GCTTAGTTCT GGTTACTGGC CCAACAGGTT CTGGTAAATC GACGACCTTA
GCAGCCATTG TTGACTACAT TAATCGTAAT CACAACAAGC ACGTACTCAC AATTGAAGAT
CCGATTGAAT TTGTTCACAA CAACAATAAA TGTTTGATCA ACCAGCGTGA AGTACACCGT
GATACGCATA GTTTCCAAAA CGCACTGCGC AGCGCATTAC GTGAAGACCC AGATGTCATT
CTGGTTGGTG AGATGCGTGA CAAAGAAACC ATCAGCCTTG CGTTAACGGC GGCGGAAACG
GGGCACTTAG TGTTCGGAAC GTTACACACC AGCTCGGCGG CAAAAACCAT TGACCGTATT
ATCGATGTGT TCCCTGGCAG CGATAAAGAC ATGGTGCGCT CGATGCTTTC TGAATCCCTT
CGTTCGGTTA TCGCGCAAAA GTTATTGAAA CGTAATGGTG GTGGCCGTAT TGCATGCCAT
GAAATCATGA TGGCAACGCC TGCGATTCGT AACTTGATCC GCGAAGACAA AGTCGCGCAG
ATGTATTCGA TCATTCAAAC TGGTGCGGCT CACGGCATGC AAACCATGGA GCAAAATGCT
CGTCAGTTAA TGGCACAAGG TATGGTCGCT CGTGAAGAGG TCGATAGTAA GATCGGGTTA
GAAGTGCAGC AATTCTCGTA A
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| Protein sequence | MDITELLDFS VKHNASDLHL SAGVPPMVRI DGDVRKLGIP AFTHQEVHRL VFEIMNDAQR
SEFEEKLEVD FSFELHNVGR FRVNAFNQSR GCAAVFRTIP SSIPTLEELE APEIFKKIAN
AEKGLVLVTG PTGSGKSTTL AAIVDYINRN HNKHVLTIED PIEFVHNNNK CLINQREVHR
DTHSFQNALR SALREDPDVI LVGEMRDKET ISLALTAAET GHLVFGTLHT SSAAKTIDRI
IDVFPGSDKD MVRSMLSESL RSVIAQKLLK RNGGGRIACH EIMMATPAIR NLIREDKVAQ
MYSIIQTGAA HGMQTMEQNA RQLMAQGMVA REEVDSKIGL EVQQFS
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